Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:11864395..11867152-chr6:11883777..11885671,2	K562	blood:
2	chr6:11865768..11868889-chr6:12009325..12011874,3	K562	blood:
3	chr6:11865768..11869319-chr6:12009325..12011874,4	K562	blood:
4	chr6:11864063..11866982-chr6:11867941..11870630,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10947602	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10947610	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1883854	0.89[ASN][1000 genomes]
rs1883855	0.91[ASN][1000 genomes]
rs1883857	0.84[ASN][1000 genomes]
rs2002735	0.92[ASN][1000 genomes]
rs2002736	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2015055	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4520010	0.88[ASN][1000 genomes]
rs4521583	0.90[ASN][1000 genomes]
rs4526189	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4711437	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4713966	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs6457919	0.91[ASN][1000 genomes]
rs6916995	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6921169	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7450581	0.90[ASN][1000 genomes]
rs7745004	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7765341	0.88[ASN][1000 genomes]
rs7767287	0.89[ASN][1000 genomes]
rs7769049	0.87[ASN][1000 genomes]
rs932441	0.89[ASN][1000 genomes]
rs9357210	0.89[ASN][1000 genomes]
rs9470271	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5201	chr6:11833966-11879236	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11859800-11867000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:11863200-11868600	Weak transcription	Fetal Stomach	stomach
3	chr6:11865800-11867200	Enhancers	Fetal Intestine Large	intestine
4	chr6:11866000-11867000	Enhancers	Fetal Intestine Small	intestine
5	chr6:11866400-11867400	Weak transcription	NH-A	brain
6	chr6:11866400-11868400	Active TSS	Liver	Liver
7	chr6:11866400-11868600	Weak transcription	Fetal Lung	lung
8	chr6:11866400-11870000	Weak transcription	Osteobl	bone
9	chr6:11866600-11868600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:11866600-11869000	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr6:11866600-11869600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr6:11866600-11869800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:11866600-11869800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:11866600-11870000	Weak transcription	NHDF-Ad	bronchial

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