Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44709340..44711190-chr6:45455747..45458398,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10807302	0.81[AFR][1000 genomes]
rs12192367	0.81[YRI][hapmap]
rs227830	0.81[EUR][1000 genomes]
rs227832	0.81[EUR][1000 genomes]
rs227833	0.81[EUR][1000 genomes]
rs227835	0.81[EUR][1000 genomes]
rs227839	0.85[EUR][1000 genomes]
rs227840	0.82[EUR][1000 genomes]
rs227844	0.88[EUR][1000 genomes]
rs227845	0.90[EUR][1000 genomes]
rs227850	0.86[JPT][hapmap]
rs227851	0.82[JPT][hapmap]
rs227852	0.90[CEU][hapmap];0.92[EUR][1000 genomes]
rs227853	0.90[CEU][hapmap];0.92[EUR][1000 genomes]
rs227854	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs227855	0.82[JPT][hapmap]
rs227857	0.92[EUR][1000 genomes]
rs3997503	0.92[EUR][1000 genomes]
rs609643	0.92[EUR][1000 genomes]
rs609699	0.92[EUR][1000 genomes]
rs687878	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7746032	0.92[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4714813	SUPT3H	cis	multi-tissue	Pritchard
rs4714813	SUPT3H	cis	Lymphoblastoid	GTEx

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44706600-44710400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:44706800-44710400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr6:44707600-44710000	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr6:44707800-44710000	Weak transcription	Fetal Intestine Small	intestine
5	chr6:44708000-44710000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr6:44708000-44710000	Weak transcription	Fetal Intestine Large	intestine
7	chr6:44709600-44710000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr6:44709800-44710800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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