Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:15119436..15121863-chr6:15121946..15124173,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1114634	0.94[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12175033	1.00[CHB][hapmap];0.98[CHD][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs12212803	0.96[ASN][1000 genomes]
rs12215015	0.81[ASN][1000 genomes]
rs13213110	0.86[ASN][1000 genomes]
rs1884120	1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs2092732	0.86[ASN][1000 genomes]
rs2092733	0.86[ASN][1000 genomes]
rs2421481	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs3800507	0.95[CHB][hapmap];0.89[JPT][hapmap]
rs4712249	0.95[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs6459394	0.87[ASN][1000 genomes]
rs6459398	0.98[ASN][1000 genomes]
rs6910972	0.98[ASN][1000 genomes]
rs6919665	0.80[ASN][1000 genomes]
rs6927040	0.98[ASN][1000 genomes]
rs6937383	0.84[ASN][1000 genomes]
rs6941421	0.95[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs7747995	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs9367862	0.98[ASN][1000 genomes]
rs9370792	0.87[ASN][1000 genomes]
rs9370793	0.84[ASN][1000 genomes]
rs9383016	0.83[JPT][hapmap]
rs9383019	0.82[ASN][1000 genomes]
rs9396559	0.98[ASN][1000 genomes]
rs9476746	0.84[ASN][1000 genomes]
rs9688891	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1016007	chr6:15099585-15159098	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2762580	chr6:15105917-15159110	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15116400-15132000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:15121800-15122800	Enhancers	K562	blood
3	chr6:15122000-15122800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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