Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10239380	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs10950516	1.00[CEU][hapmap]
rs10950517	1.00[CEU][hapmap]
rs10950518	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs2108514	0.85[CEU][hapmap]
rs2108515	0.92[CEU][hapmap]
rs2159020	1.00[CEU][hapmap]
rs2215035	1.00[CEU][hapmap]
rs4385371	1.00[CEU][hapmap]
rs4463321	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs6415237	0.84[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6461083	1.00[CEU][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6945418	0.80[EUR][1000 genomes]
rs6955155	1.00[CEU][hapmap]
rs6960014	1.00[CEU][hapmap]
rs6962476	0.84[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7785249	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs7793052	0.92[CEU][hapmap]
rs7796825	0.92[CEU][hapmap]
rs969689	1.00[CEU][hapmap]
rs979720	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv3388174	chr7:14348761-14369819	Weak transcription Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14358400-14361800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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