Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:27758786..27760428-chr7:27763695..27765220,2	K562	blood:
2	chr7:27760895..27765009-chr7:27778985..27781333,5	K562	blood:
3	chr7:27763575..27766795-chr7:27768308..27771533,3	K562	blood:

Variant related genes	Relation type
ENSG00000229893	Chromatin interaction
ENSG00000106052	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11973028	0.82[EUR][1000 genomes]
rs17611937	0.96[ASN][1000 genomes]
rs17685046	0.98[ASN][1000 genomes]
rs2051829	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2237337	0.98[ASN][1000 genomes]
rs2391486	0.82[ASN][1000 genomes]
rs34369550	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4722732	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4722739	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4722742	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55714615	1.00[ASN][1000 genomes]
rs56137979	0.98[ASN][1000 genomes]
rs61538692	0.98[ASN][1000 genomes]
rs62449631	0.98[ASN][1000 genomes]
rs6974060	0.98[ASN][1000 genomes]
rs6978847	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs757964	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7785305	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7796790	0.92[ASN][1000 genomes]
rs7804317	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7808062	0.92[ASN][1000 genomes]
rs960293	0.98[ASN][1000 genomes]
rs960294	0.98[ASN][1000 genomes]
rs9638847	0.98[ASN][1000 genomes]
rs9639564	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4722733	TAX1BP1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27760000-27778800	Weak transcription	HSMMtube	muscle

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