Variant report

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1012825	0.95[ASN][1000 genomes]
rs10238400	0.87[CEU][hapmap];0.82[CHB][hapmap];0.88[EUR][1000 genomes]
rs10239304	0.88[EUR][1000 genomes]
rs10250164	0.82[ASN][1000 genomes]
rs10266086	0.86[EUR][1000 genomes]
rs10270142	0.84[ASN][1000 genomes]
rs10275278	0.81[ASN][1000 genomes]
rs1034699	0.93[ASN][1000 genomes]
rs1034701	0.93[ASN][1000 genomes]
rs10954036	0.87[ASN][1000 genomes]
rs11769881	0.84[ASN][1000 genomes]
rs11975430	0.95[ASN][1000 genomes]
rs12154241	0.86[ASN][1000 genomes]
rs12154320	0.86[ASN][1000 genomes]
rs13437829	0.93[ASN][1000 genomes]
rs17804483	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2012262	0.92[ASN][1000 genomes]
rs28588381	0.86[ASN][1000 genomes]
rs28601738	0.85[ASN][1000 genomes]
rs28609969	0.93[ASN][1000 genomes]
rs28698330	0.93[ASN][1000 genomes]
rs35706262	0.88[EUR][1000 genomes]
rs4727999	0.88[ASN][1000 genomes]
rs4731198	0.91[EUR][1000 genomes]
rs58785310	0.89[ASN][1000 genomes]
rs6466916	0.86[ASN][1000 genomes]
rs67486586	0.93[ASN][1000 genomes]
rs6945977	0.89[ASN][1000 genomes]
rs6946088	0.82[EUR][1000 genomes]
rs6949030	0.85[EUR][1000 genomes]
rs6966238	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6967162	0.85[EUR][1000 genomes]
rs6973146	0.83[ASN][1000 genomes]
rs6978279	0.81[EUR][1000 genomes]
rs73147801	0.86[EUR][1000 genomes]
rs7778622	0.88[ASN][1000 genomes]
rs7783336	0.93[ASN][1000 genomes]
rs7799402	0.93[ASN][1000 genomes]
rs9655843	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv607678	chr7:79665817-79726578	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1027494	chr7:79693976-79760332	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:79719800-79722000	Weak transcription	Fetal Lung	lung
2	chr7:79721400-79735000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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