The 2.0 version of rSNPBase

Variant report

Variant rs473497
Chromosome Location chr6:143118863-143118864
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143095800-143122200 Weak transcription NHEK skin
2 chr6:143096000-143122000 Weak transcription Fetal Intestine Small intestine
3 chr6:143096200-143120800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:143096200-143140800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr6:143103600-143124800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:143103800-143125400 Weak transcription Fetal Thymus thymus
7 chr6:143105800-143121000 Weak transcription Brain Angular Gyrus brain
8 chr6:143105800-143140400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:143106000-143128200 Weak transcription Primary hematopoietic stem cells blood
10 chr6:143106000-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr6:143108200-143121200 Weak transcription HSMM muscle
12 chr6:143108400-143119400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:143108800-143123600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:143109200-143121000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr6:143112200-143139400 Weak transcription HepG2 liver
16 chr6:143113200-143119400 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr6:143113200-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:143113800-143120800 Weak transcription Pancreas Pancrea
19 chr6:143114200-143140800 Weak transcription Fetal Muscle Leg muscle
20 chr6:143116000-143121000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:143116000-143125400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr6:143116000-143139600 Weak transcription Small Intestine intestine
23 chr6:143116200-143132200 Weak transcription Fetal Brain Female brain
24 chr6:143117000-143129400 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr6:143117000-143140800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr6:143117400-143119200 Weak transcription Stomach Mucosa stomach
27 chr6:143117600-143120400 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr6:143117600-143120800 Enhancers Primary T helper cells PMA-I stimulated --
29 chr6:143117600-143121400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr6:143117600-143122800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:143118000-143119000 Enhancers GM12878-XiMat blood
32 chr6:143118000-143119200 Weak transcription Primary T cells fromperipheralblood blood
33 chr6:143118000-143119200 Weak transcription Brain Anterior Caudate brain
34 chr6:143118000-143123200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr6:143118000-143126200 Weak transcription Right Ventricle heart
36 chr6:143118000-143132200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:143118000-143137600 Weak transcription Right Atrium heart
38 chr6:143118200-143119200 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr6:143118200-143119400 Weak transcription Brain Substantia Nigra brain
40 chr6:143118200-143119600 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr6:143118200-143119600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr6:143118200-143119800 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr6:143118200-143120400 Weak transcription Muscle Satellite Cultured Cells --
44 chr6:143118200-143120400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:143118200-143120400 Weak transcription Osteobl bone
46 chr6:143118200-143120800 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr6:143118200-143120800 Weak transcription NHDF-Ad bronchial
48 chr6:143118200-143122000 Weak transcription Fetal Lung lung
49 chr6:143118200-143123200 Weak transcription Fetal Heart heart
50 chr6:143118200-143123200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015