The 2.0 version of rSNPBase

Variant report

Variant rs507404
Chromosome Location chr6:143129616-143129617
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143096200-143140800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:143105800-143140400 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr6:143106000-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr6:143112200-143139400 Weak transcription HepG2 liver
5 chr6:143113200-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr6:143114200-143140800 Weak transcription Fetal Muscle Leg muscle
7 chr6:143116000-143139600 Weak transcription Small Intestine intestine
8 chr6:143116200-143132200 Weak transcription Fetal Brain Female brain
9 chr6:143117000-143140800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr6:143118000-143132200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:143118000-143137600 Weak transcription Right Atrium heart
12 chr6:143119800-143130000 Weak transcription Brain Substantia Nigra brain
13 chr6:143121000-143133000 Weak transcription Pancreas Pancrea
14 chr6:143121200-143138400 Weak transcription Primary B cells from peripheral blood blood
15 chr6:143123400-143132000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr6:143123400-143140600 Weak transcription HSMM muscle
17 chr6:143123400-143144000 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr6:143123600-143130200 Weak transcription Brain Cingulate Gyrus brain
19 chr6:143123600-143132000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr6:143123600-143132000 Weak transcription Fetal Brain Male brain
21 chr6:143123600-143132200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:143123600-143139400 Weak transcription Fetal Intestine Small intestine
23 chr6:143123800-143132000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr6:143123800-143132400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:143124000-143132000 Weak transcription NHDF-Ad bronchial
26 chr6:143124000-143132200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr6:143124000-143137400 Weak transcription NH-A brain
28 chr6:143124000-143140600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:143124000-143140800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr6:143124200-143132000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:143124200-143132000 Weak transcription NHLF lung
32 chr6:143124200-143137400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:143124200-143140600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:143124400-143140800 Weak transcription NHEK skin
35 chr6:143124600-143137200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr6:143125000-143130200 Weak transcription Brain Angular Gyrus brain
37 chr6:143125000-143130600 Strong transcription Primary B cells from cord blood blood
38 chr6:143125000-143131600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr6:143125000-143141000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr6:143125200-143130200 Genic enhancers Primary T helper cells PMA-I stimulated --
41 chr6:143125200-143130200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr6:143125200-143140800 Weak transcription HMEC breast
43 chr6:143126000-143138800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:143126400-143132200 Weak transcription Spleen Spleen
45 chr6:143126600-143132800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr6:143126600-143133000 Weak transcription Left Ventricle heart
47 chr6:143126800-143131600 Weak transcription Fetal Stomach stomach
48 chr6:143126800-143140800 Weak transcription Aorta Aorta
49 chr6:143127000-143131600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:143127000-143133200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015