The 2.0 version of rSNPBase

Variant report

Variant rs519874
Chromosome Location chr6:143118103-143118104
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143095800-143122200 Weak transcription NHEK skin
2 chr6:143096000-143122000 Weak transcription Fetal Intestine Small intestine
3 chr6:143096200-143120800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:143096200-143140800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr6:143103600-143124800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:143103800-143125400 Weak transcription Fetal Thymus thymus
7 chr6:143105800-143121000 Weak transcription Brain Angular Gyrus brain
8 chr6:143105800-143140400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:143106000-143118800 Weak transcription Primary B cells from cord blood blood
10 chr6:143106000-143128200 Weak transcription Primary hematopoietic stem cells blood
11 chr6:143106000-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr6:143108200-143121200 Weak transcription HSMM muscle
13 chr6:143108400-143119400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:143108800-143123600 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr6:143109200-143121000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr6:143112200-143139400 Weak transcription HepG2 liver
17 chr6:143113200-143119400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr6:143113200-143140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:143113800-143120800 Weak transcription Pancreas Pancrea
20 chr6:143114200-143140800 Weak transcription Fetal Muscle Leg muscle
21 chr6:143116000-143121000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr6:143116000-143125400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr6:143116000-143139600 Weak transcription Small Intestine intestine
24 chr6:143116200-143132200 Weak transcription Fetal Brain Female brain
25 chr6:143117000-143129400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr6:143117000-143140800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr6:143117200-143118200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr6:143117200-143118800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:143117400-143118200 Enhancers Primary neutrophils fromperipheralblood blood
30 chr6:143117400-143118200 Enhancers Muscle Satellite Cultured Cells --
31 chr6:143117400-143118200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr6:143117400-143118400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:143117400-143118600 Enhancers Primary T cells from cord blood blood
34 chr6:143117400-143119200 Weak transcription Stomach Mucosa stomach
35 chr6:143117600-143118200 Enhancers Primary monocytes fromperipheralblood blood
36 chr6:143117600-143118200 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr6:143117600-143118200 Enhancers Adipose Nuclei Adipose
38 chr6:143117600-143118200 Enhancers Fetal Lung lung
39 chr6:143117600-143118400 Enhancers Monocytes-CD14+_RO01746 blood
40 chr6:143117600-143118800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:143117600-143118800 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr6:143117600-143120400 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr6:143117600-143120800 Enhancers Primary T helper cells PMA-I stimulated --
44 chr6:143117600-143121400 Enhancers Primary T helper cells fromperipheralblood blood
45 chr6:143117600-143122800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:143117800-143118200 Enhancers Fetal Heart heart
47 chr6:143117800-143118200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr6:143117800-143118200 Enhancers NHDF-Ad bronchial
49 chr6:143117800-143118200 Enhancers Osteobl bone
50 chr6:143118000-143118200 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015