Variant report

Variant rs4839780
Chromosome Location chr6:100909398-100909399
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:100902000-100913600 Active TSS Psoas Muscle Psoas
2 chr6:100906600-100914200 Bivalent/Poised TSS Fetal Kidney kidney
3 chr6:100906800-100914400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr6:100906800-100914600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr6:100907200-100909400 Active TSS Skeletal Muscle Female skeletal muscle
6 chr6:100907400-100913600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr6:100908000-100913600 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr6:100908000-100913800 Bivalent/Poised TSS NHDF-Ad bronchial
9 chr6:100908000-100914800 Active TSS Pancreatic Islets Pancreatic Islet
10 chr6:100908200-100911000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr6:100908400-100909400 Enhancers Dnd41 blood
12 chr6:100908400-100911200 Bivalent/Poised TSS Adipose Nuclei Adipose
13 chr6:100908400-100913800 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr6:100908600-100909400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
15 chr6:100908600-100909400 Active TSS Pancreas Pancrea
16 chr6:100908600-100909600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
17 chr6:100908600-100909600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
18 chr6:100908600-100909600 Bivalent/Poised TSS Fetal Muscle Trunk muscle
19 chr6:100908600-100910600 Active TSS A549 lung
20 chr6:100908600-100913400 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:100908600-100913400 Active TSS HSMM muscle
22 chr6:100908600-100913600 Active TSS HSMMtube muscle
23 chr6:100908800-100909400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
24 chr6:100908800-100909400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
25 chr6:100908800-100909600 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
26 chr6:100908800-100909600 Enhancers Right Ventricle heart
27 chr6:100908800-100909800 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
28 chr6:100908800-100910000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
29 chr6:100908800-100910000 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
30 chr6:100908800-100910400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
31 chr6:100908800-100911800 Bivalent/Poised TSS Fetal Muscle Leg muscle
32 chr6:100908800-100914000 Active TSS Muscle Satellite Cultured Cells --
33 chr6:100909000-100909400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
34 chr6:100909000-100909400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
35 chr6:100909000-100909400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:100909000-100909400 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
37 chr6:100909000-100909600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr6:100909000-100909600 Bivalent Enhancer Primary T cells fromperipheralblood blood
39 chr6:100909000-100909600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
40 chr6:100909000-100909600 Flanking Bivalent TSS/Enh HUVEC blood vessel
41 chr6:100909000-100910200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
42 chr6:100909000-100910400 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
43 chr6:100909200-100909400 Bivalent Enhancer H1 Cell Line embryonic stem cell
44 chr6:100909200-100909400 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr6:100909200-100909400 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:100909200-100909400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
47 chr6:100909200-100909400 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
48 chr6:100909200-100909400 Bivalent Enhancer Brain Germinal Matrix brain
49 chr6:100909200-100909400 Bivalent Enhancer Left Ventricle heart
50 chr6:100909200-100909400 Flanking Bivalent TSS/Enh Placenta Amnion Placenta Amnion

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