The 2.0 version of rSNPBase

Variant report

Variant rs4844491
Chromosome Location chr1:209938075-209938076
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209921800-209940800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:209921800-209942000 Weak transcription Pancreas Pancrea
3 chr1:209930800-209938800 Weak transcription Fetal Intestine Large intestine
4 chr1:209931000-209941800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:209931000-209942000 Weak transcription Esophagus oesophagus
6 chr1:209931000-209943200 Weak transcription Lung lung
7 chr1:209931000-209943600 Weak transcription Gastric stomach
8 chr1:209931800-209940600 Weak transcription Rectal Smooth Muscle rectum
9 chr1:209932200-209941200 Genic enhancers Primary monocytes fromperipheralblood blood
10 chr1:209932200-209941400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:209932200-209941800 Weak transcription Colonic Mucosa Colon
12 chr1:209932200-209942000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:209932600-209940000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr1:209932800-209939400 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr1:209933000-209940000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr1:209933000-209940800 Genic enhancers Primary T cells fromperipheralblood blood
17 chr1:209933200-209939400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:209933200-209939400 Weak transcription Duodenum Mucosa Duodenum
19 chr1:209933400-209939400 Strong transcription Thymus Thymus
20 chr1:209933400-209940600 Genic enhancers Primary T helper cells PMA-I stimulated --
21 chr1:209933600-209940800 Genic enhancers Primary T helper cells fromperipheralblood blood
22 chr1:209933800-209939200 Weak transcription Fetal Intestine Small intestine
23 chr1:209933800-209941600 Weak transcription Fetal Muscle Leg muscle
24 chr1:209934000-209941600 Weak transcription Colon Smooth Muscle Colon
25 chr1:209934600-209941600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:209934800-209939200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:209934800-209940600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:209934800-209941800 Weak transcription Right Ventricle heart
29 chr1:209934800-209942000 Weak transcription Brain Substantia Nigra brain
30 chr1:209934800-209942000 Weak transcription Right Atrium heart
31 chr1:209935000-209940600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
32 chr1:209935200-209938200 Strong transcription Primary B cells from cord blood blood
33 chr1:209935200-209940600 Genic enhancers Primary T regulatory cells fromperipheralblood blood
34 chr1:209935400-209938800 Genic enhancers Primary T cells from cord blood blood
35 chr1:209935400-209939200 Strong transcription Fetal Thymus thymus
36 chr1:209935800-209939400 Strong transcription Primary B cells from peripheral blood blood
37 chr1:209936000-209939200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:209936600-209940800 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:209936800-209938200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:209937000-209941600 Weak transcription Spleen Spleen
41 chr1:209937800-209938800 Weak transcription Dnd41 blood
42 chr1:209937800-209938800 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:209937800-209939000 Weak transcription Primary hematopoietic stem cells blood
44 chr1:209937800-209939000 Enhancers Primary T killer memory cells from peripheral blood blood
45 chr1:209937800-209939200 Weak transcription GM12878-XiMat blood
46 chr1:209937800-209940800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr1:209938000-209938800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:209938000-209938800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:209938000-209939000 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015