The 2.0 version of rSNPBase

Variant report

Variant rs57283682
Chromosome Location chr1:209926027-209926028
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209921400-209929800 Weak transcription Right Atrium heart
2 chr1:209921400-209930000 Weak transcription Right Ventricle heart
3 chr1:209921600-209926600 Enhancers Primary T cells fromperipheralblood blood
4 chr1:209921600-209926600 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr1:209921600-209926800 Enhancers Primary monocytes fromperipheralblood blood
6 chr1:209921800-209929600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:209921800-209930000 Weak transcription Stomach Mucosa stomach
8 chr1:209921800-209940800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:209921800-209942000 Weak transcription Pancreas Pancrea
10 chr1:209922000-209928800 Enhancers Primary neutrophils fromperipheralblood blood
11 chr1:209922400-209931200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:209923800-209926600 Enhancers Primary B cells from cord blood blood
13 chr1:209923800-209926600 Enhancers Primary B cells from peripheral blood blood
14 chr1:209925000-209926200 Enhancers Fetal Intestine Large intestine
15 chr1:209925400-209928400 Weak transcription Thymus Thymus
16 chr1:209925400-209929000 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr1:209925600-209926800 Enhancers Primary T cells from cord blood blood
18 chr1:209925600-209928600 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:209925600-209929000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:209925800-209926800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:209925800-209926800 Enhancers Monocytes-CD14+_RO01746 blood
22 chr1:209925800-209928400 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr1:209925800-209928400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:209925800-209928400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:209925800-209928800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr1:209925800-209928800 Weak transcription Fetal Intestine Small intestine
27 chr1:209926000-209926200 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr1:209926000-209926400 Enhancers GM12878-XiMat blood
29 chr1:209926000-209927800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:209926000-209927800 Weak transcription Fetal Thymus thymus
31 chr1:209926000-209928200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:209926000-209928400 Weak transcription Primary hematopoietic stem cells blood
33 chr1:209926000-209928400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:209926000-209928600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr1:209926000-209928800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
36 chr1:209926000-209928800 Enhancers Primary T regulatory cells fromperipheralblood blood
37 chr1:209926000-209928800 Weak transcription Duodenum Mucosa Duodenum
38 chr1:209926000-209929000 Enhancers Primary T helper cells fromperipheralblood blood
39 chr1:209926000-209929600 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015