The 2.0 version of rSNPBase

Variant report

Variant rs11119360
Chromosome Location chr1:210056576-210056577
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210049400-210056600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:210051000-210057400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:210053000-210056600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:210053600-210057800 Enhancers Muscle Satellite Cultured Cells --
5 chr1:210053600-210058000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:210053600-210058800 Enhancers Brain Hippocampus Middle brain
7 chr1:210053800-210056800 Weak transcription Hela-S3 cervix
8 chr1:210054000-210056600 Weak transcription Brain Angular Gyrus brain
9 chr1:210055400-210056600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:210055600-210060400 Enhancers HSMMtube muscle
11 chr1:210055800-210057800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:210055800-210058400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:210055800-210058400 Enhancers Cortex derived primary cultured neurospheres brain
14 chr1:210055800-210060000 Weak transcription Pancreas Pancrea
15 chr1:210055800-210060200 Enhancers HSMM muscle
16 chr1:210056000-210057400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:210056200-210057000 Enhancers NHDF-Ad bronchial
18 chr1:210056200-210057200 Enhancers NH-A brain
19 chr1:210056200-210057200 Enhancers Osteobl bone
20 chr1:210056200-210058400 Enhancers Fetal Brain Female brain
21 chr1:210056200-210058600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:210056200-210060400 Enhancers NHEK skin
23 chr1:210056400-210056600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:210056400-210056600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:210056400-210056600 Enhancers Fetal Lung lung
26 chr1:210056400-210056800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:210056400-210056800 Flanking Active TSS Pancreatic Islets Pancreatic Islet
28 chr1:210056400-210057400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:210056400-210057600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:210056400-210058000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:210056400-210058400 Enhancers Brain Cingulate Gyrus brain
32 chr1:210056400-210058600 Enhancers Placenta Amnion Placenta Amnion
33 chr1:210056400-210058800 Enhancers HUVEC blood vessel
34 chr1:210056400-210059000 Enhancers NHLF lung
35 chr1:210056400-210059400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:210056400-210059800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:210056400-210060400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:210056400-210060400 Enhancers HMEC breast

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Last update: Aug 31, 2015