The 2.0 version of rSNPBase

Variant report

Variant rs4845689
Chromosome Location chr1:154885524-154885525
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154879200-154893200 Weak transcription Stomach Smooth Muscle stomach
2 chr1:154879800-154894800 Weak transcription Aorta Aorta
3 chr1:154880400-154894400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:154881400-154894800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr1:154881600-154895800 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:154882200-154891200 Weak transcription Fetal Stomach stomach
7 chr1:154882400-154897800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:154882600-154889200 Weak transcription Fetal Intestine Small intestine
9 chr1:154882800-154897400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:154883200-154887200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:154883400-154894800 Weak transcription Primary T cells from cord blood blood
12 chr1:154883600-154886800 Enhancers Skeletal Muscle Male skeletal muscle
13 chr1:154883600-154893200 Weak transcription Liver Liver
14 chr1:154883600-154895000 Weak transcription Placenta Placenta
15 chr1:154883800-154886800 Enhancers Fetal Heart heart
16 chr1:154883800-154894800 Weak transcription Brain Germinal Matrix brain
17 chr1:154884000-154893400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:154884000-154894600 Weak transcription Gastric stomach
19 chr1:154884000-154895200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr1:154884000-154897800 Weak transcription HMEC breast
21 chr1:154884200-154886800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:154884200-154887200 Enhancers Left Ventricle heart
23 chr1:154884400-154885800 Strong transcription Fetal Brain Female brain
24 chr1:154884600-154887000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:154884600-154887000 Weak transcription NHEK skin
26 chr1:154884600-154887200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:154884600-154894800 Weak transcription Adipose Nuclei Adipose
28 chr1:154884800-154887000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:154884800-154894800 Weak transcription Brain Substantia Nigra brain
30 chr1:154884800-154894800 Weak transcription Spleen Spleen
31 chr1:154884800-154896200 Weak transcription Colon Smooth Muscle Colon
32 chr1:154884800-154908400 Weak transcription Psoas Muscle Psoas
33 chr1:154885000-154886400 Weak transcription Right Atrium heart
34 chr1:154885000-154889200 Weak transcription GM12878-XiMat blood
35 chr1:154885000-154892600 Weak transcription Fetal Muscle Leg muscle
36 chr1:154885000-154894800 Weak transcription Esophagus oesophagus
37 chr1:154885000-154895000 Weak transcription Brain Anterior Caudate brain
38 chr1:154885000-154895000 Weak transcription Ovary ovary
39 chr1:154885200-154885600 Weak transcription Right Ventricle heart
40 chr1:154885200-154886400 Enhancers HepG2 liver
41 chr1:154885200-154892600 Weak transcription Primary B cells from peripheral blood blood
42 chr1:154885200-154895000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:154885400-154894800 Weak transcription Lung lung

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Last update: Aug 31, 2015