Variant report

Variant rs2335407
Chromosome Location chr1:154843347-154843348
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154841600-154843400 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
2 chr1:154841800-154843400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
3 chr1:154842000-154843400 Enhancers Primary hematopoietic stem cells blood
4 chr1:154842000-154843400 Active TSS Fetal Brain Female brain
5 chr1:154842200-154843400 Bivalent Enhancer Fetal Thymus thymus
6 chr1:154842400-154843400 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
7 chr1:154842400-154843400 Flanking Active TSS Brain Inferior Temporal Lobe brain
8 chr1:154842600-154843400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:154842600-154843400 Active TSS iPS-20b Cell Line embryonic stem cell
10 chr1:154842600-154844000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr1:154842800-154843400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
12 chr1:154842800-154843400 Enhancers Esophagus oesophagus
13 chr1:154842800-154843400 Active TSS A549 lung
14 chr1:154842800-154844200 Bivalent Enhancer Primary B cells from peripheral blood blood
15 chr1:154843000-154843400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:154843000-154843400 Flanking Active TSS Brain Angular Gyrus brain
17 chr1:154843000-154843400 Flanking Active TSS Brain Anterior Caudate brain
18 chr1:154843000-154843400 Flanking Active TSS Brain Cingulate Gyrus brain
19 chr1:154843000-154843400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
20 chr1:154843000-154843400 Flanking Active TSS Brain Substantia Nigra brain
21 chr1:154843000-154843400 Flanking Bivalent TSS/Enh Colon Smooth Muscle Colon
22 chr1:154843000-154843400 Flanking Active TSS Fetal Intestine Small intestine
23 chr1:154843000-154843400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
24 chr1:154843000-154843600 Flanking Active TSS GM12878-XiMat blood
25 chr1:154843200-154843400 Enhancers H1 Cell Line embryonic stem cell
26 chr1:154843200-154843400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:154843200-154843400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:154843200-154843400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:154843200-154843400 Enhancers HUES48 Cell Line embryonic stem cell
30 chr1:154843200-154843400 Bivalent Enhancer Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:154843200-154843400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:154843200-154843400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:154843200-154843400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:154843200-154843400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:154843200-154843400 Enhancers Brain Germinal Matrix brain
36 chr1:154843200-154843400 Enhancers Brain Hippocampus Middle brain
37 chr1:154843200-154843400 Enhancers Duodenum Smooth Muscle Duodenum
38 chr1:154843200-154843400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
39 chr1:154843200-154843400 Enhancers Left Ventricle heart
40 chr1:154843200-154843400 Enhancers Pancreas Pancrea
41 chr1:154843200-154843400 Enhancers Rectal Smooth Muscle rectum
42 chr1:154843200-154843400 Enhancers Skeletal Muscle Male skeletal muscle
43 chr1:154843200-154843600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:154843200-154843600 Enhancers Fetal Brain Male brain
45 chr1:154843200-154843600 Enhancers Fetal Heart heart
46 chr1:154843200-154843600 Bivalent Enhancer HepG2 liver
47 chr1:154843200-154843800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:154843200-154844000 Enhancers HUES6 Cell Line embryonic stem cell
49 chr1:154843200-154844000 Enhancers Duodenum Mucosa Duodenum
50 chr1:154843200-154844200 Enhancers H9 Cell Line embryonic stem cell

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