The 2.0 version of rSNPBase

Variant report

Variant rs6686873
Chromosome Location chr1:154913404-154913405
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154910200-154913600 Weak transcription Ovary ovary
2 chr1:154910200-154913800 Weak transcription Pancreas Pancrea
3 chr1:154910200-154914200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:154910400-154914800 Enhancers Primary B cells from peripheral blood blood
5 chr1:154910400-154914800 Enhancers Fetal Thymus thymus
6 chr1:154910400-154916600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:154910400-154916600 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr1:154910400-154916800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:154910400-154917000 Enhancers Primary hematopoietic stem cells blood
10 chr1:154910400-154920000 Weak transcription Aorta Aorta
11 chr1:154910400-154923000 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:154910400-154925000 Weak transcription Psoas Muscle Psoas
13 chr1:154910600-154913600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:154910600-154913800 Weak transcription Fetal Stomach stomach
15 chr1:154910600-154914000 Weak transcription A549 lung
16 chr1:154910600-154914400 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr1:154910600-154914800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:154910600-154915000 Enhancers Primary T cells fromperipheralblood blood
19 chr1:154910600-154915000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr1:154910600-154915400 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:154910600-154916800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:154910600-154927200 Weak transcription Fetal Kidney kidney
23 chr1:154910800-154913600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:154910800-154913600 Weak transcription Fetal Brain Male brain
25 chr1:154910800-154913800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:154910800-154913800 Weak transcription Thymus Thymus
27 chr1:154910800-154914000 Weak transcription Brain Angular Gyrus brain
28 chr1:154910800-154914000 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:154910800-154914400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:154910800-154914400 Weak transcription NHDF-Ad bronchial
31 chr1:154910800-154914600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:154910800-154914800 Enhancers Primary T helper cells fromperipheralblood blood
33 chr1:154910800-154914800 Weak transcription Osteobl bone
34 chr1:154910800-154915600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:154910800-154916000 Weak transcription HUVEC blood vessel
36 chr1:154910800-154916200 Weak transcription Colon Smooth Muscle Colon
37 chr1:154910800-154927200 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:154910800-154927200 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr1:154911000-154914200 Weak transcription HSMMtube muscle
40 chr1:154911000-154914400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:154911000-154914600 Enhancers Primary T helper cells PMA-I stimulated --
42 chr1:154911000-154921400 Weak transcription NHLF lung
43 chr1:154911400-154913800 Weak transcription HSMM muscle
44 chr1:154911400-154916600 Weak transcription Fetal Heart heart
45 chr1:154911400-154917200 Weak transcription Rectal Smooth Muscle rectum
46 chr1:154911800-154913600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:154911800-154913600 Weak transcription Lung lung
48 chr1:154911800-154913800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr1:154911800-154914000 Weak transcription Colonic Mucosa Colon
50 chr1:154911800-154914800 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015