Variant report

Variant	rs4846644
Chromosome Location	chr1:216856852-216856853
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11117642	0.81[AMR][1000 genomes]
rs11117643	0.81[CHB][hapmap];0.80[AMR][1000 genomes]
rs11117656	0.90[YRI][hapmap];0.87[AMR][1000 genomes]
rs12027901	0.81[CHB][hapmap]
rs12028510	0.80[CHB][hapmap];0.85[AMR][1000 genomes]
rs12754372	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1498278	0.87[YRI][hapmap];0.80[AMR][1000 genomes]
rs17043350	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2789718	0.81[CHB][hapmap]
rs2820879	0.81[CHB][hapmap]
rs4846617	0.81[CHB][hapmap]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216834400-216860400	Weak transcription	Right Ventricle	heart
2	chr1:216840200-216863600	Weak transcription	Fetal Intestine Small	intestine
3	chr1:216844000-216860000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:216844200-216861000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr1:216850800-216860000	Weak transcription	Left Ventricle	heart
6	chr1:216851000-216866000	Weak transcription	Placenta	Placenta
7	chr1:216854000-216860000	Weak transcription	Pancreas	Pancrea
8	chr1:216855400-216857600	Enhancers	Fetal Heart	heart
9	chr1:216855600-216860800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr1:216856200-216859200	Enhancers	Pancreatic Islets	Pancreatic Islet
11	chr1:216856400-216859200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr1:216856400-216859200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr1:216856400-216869800	Weak transcription	Psoas Muscle	Psoas
14	chr1:216856600-216858800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr1:216856600-216860000	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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