The 2.0 version of rSNPBase

Variant report

Variant rs4858556
Chromosome Location chr3:23956575-23956576
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23922400-23956600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr3:23923000-23956600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr3:23923400-23957000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr3:23923600-23956800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr3:23924200-23957800 Weak transcription Esophagus oesophagus
6 chr3:23924200-23957800 Weak transcription Lung lung
7 chr3:23928000-23957200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr3:23928800-23957400 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:23929000-23956600 Weak transcription Rectal Smooth Muscle rectum
10 chr3:23930800-23956800 Weak transcription Brain Hippocampus Middle brain
11 chr3:23934200-23956600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr3:23935000-23957400 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr3:23936800-23957200 Weak transcription Brain Substantia Nigra brain
14 chr3:23937000-23956600 Weak transcription Primary T cells fromperipheralblood blood
15 chr3:23939800-23956600 Weak transcription Fetal Brain Male brain
16 chr3:23940400-23956600 Weak transcription Pancreas Pancrea
17 chr3:23940600-23956600 Weak transcription Brain Germinal Matrix brain
18 chr3:23940600-23956800 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr3:23940800-23956600 Weak transcription Left Ventricle heart
20 chr3:23940800-23956600 Weak transcription NHLF lung
21 chr3:23940800-23957000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr3:23940800-23957200 Weak transcription Right Ventricle heart
23 chr3:23941000-23956600 Weak transcription Primary B cells from cord blood blood
24 chr3:23941400-23956800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr3:23942000-23956600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr3:23942200-23956600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr3:23942600-23957000 Weak transcription H9 Cell Line embryonic stem cell
28 chr3:23942800-23956600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr3:23942800-23957000 Weak transcription Stomach Smooth Muscle stomach
30 chr3:23943000-23956600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:23943000-23957200 Weak transcription Primary T cells from cord blood blood
32 chr3:23944600-23957200 Weak transcription HSMMtube muscle
33 chr3:23944800-23957000 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr3:23946000-23957000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:23946000-23957800 Weak transcription Gastric stomach
36 chr3:23949200-23956600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr3:23952000-23956600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr3:23952000-23956600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr3:23952000-23957200 Weak transcription Spleen Spleen
40 chr3:23952000-23957800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr3:23952200-23956600 Weak transcription Ovary ovary
42 chr3:23952400-23957200 Weak transcription HSMM muscle
43 chr3:23952400-23957600 Weak transcription Fetal Muscle Trunk muscle
44 chr3:23952600-23956600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr3:23952600-23956600 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr3:23952600-23956600 Weak transcription Fetal Muscle Leg muscle
47 chr3:23952600-23956800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr3:23952600-23956800 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr3:23952600-23957000 Weak transcription Primary B cells from peripheral blood blood
50 chr3:23952600-23957400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015