Variant report
Variant | rs486885 |
---|---|
Chromosome Location | chr8:9803386-9803387 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:9803039..9805546-chr8:9809803..9812661,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11778848 | 1.00[AMR][1000 genomes] |
rs2137788 | 1.00[AMR][1000 genomes] |
rs2175845 | 1.00[AMR][1000 genomes] |
rs28521097 | 1.00[AMR][1000 genomes] |
rs28706097 | 1.00[AMR][1000 genomes] |
rs2898236 | 1.00[AMR][1000 genomes] |
rs4840451 | 1.00[AMR][1000 genomes] |
rs4841248 | 1.00[AMR][1000 genomes] |
rs4841249 | 1.00[AMR][1000 genomes] |
rs542203 | 1.00[AMR][1000 genomes] |
rs578685 | 1.00[AMR][1000 genomes] |
rs589424 | 1.00[AMR][1000 genomes] |
rs6601394 | 1.00[AMR][1000 genomes] |
rs660923 | 1.00[AMR][1000 genomes] |
rs670475 | 1.00[AMR][1000 genomes] |
rs6984048 | 1.00[AMR][1000 genomes] |
rs6985570 | 1.00[AMR][1000 genomes] |
rs7002484 | 1.00[AMR][1000 genomes] |
rs7008206 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv530864 | chr8:9097498-9914548 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 39 gene(s) | inside rSNPs | diseases |
2 | nsv1023834 | chr8:9798072-9904788 | Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers | Chromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:9801800-9803800 | Enhancers | Fetal Brain Male | brain |