Variant report

Variant	rs4903739
Chromosome Location	chr14:78757013-78757014
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1004667	0.81[EUR][1000 genomes]
rs10147289	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10147843	0.88[EUR][1000 genomes]
rs11159348	0.82[ASN][1000 genomes]
rs11159350	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1523131	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1882811	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1882812	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1882815	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2205164	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4503718	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4903742	0.82[ASN][1000 genomes]
rs4903743	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7140340	0.82[ASN][1000 genomes]
rs7152608	0.80[ASN][1000 genomes]
rs8021038	0.87[EUR][1000 genomes]
rs926099	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78738600-78778200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:78738600-78779000	Weak transcription	Brain Angular Gyrus	brain
4	chr14:78745000-78757800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:78749400-78764000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr14:78750200-78778400	Weak transcription	Brain Anterior Caudate	brain
7	chr14:78753000-78764200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr14:78757000-78757400	Weak transcription	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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