Variant report

Variant	rs10147843
Chromosome Location	chr14:78739801-78739802
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1004667	1.00[CHB][hapmap];0.86[JPT][hapmap];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10147289	1.00[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1523131	0.82[EUR][1000 genomes]
rs1569325	0.81[CHB][hapmap]
rs1882809	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1882811	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1882812	0.81[EUR][1000 genomes]
rs1882815	0.81[EUR][1000 genomes]
rs1882816	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs4503718	0.81[EUR][1000 genomes]
rs4903733	0.83[EUR][1000 genomes]
rs4903735	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4903739	0.88[EUR][1000 genomes]
rs4903743	0.81[EUR][1000 genomes]
rs7158430	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs8021038	0.81[EUR][1000 genomes]
rs909199	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs926099	0.95[CEU][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9805887	0.82[CHB][hapmap];0.87[JPT][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78731400-78748200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:78738600-78778200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:78738600-78779000	Weak transcription	Brain Angular Gyrus	brain
5	chr14:78739000-78744400	Weak transcription	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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