Variant report

Variant	rs926099
Chromosome Location	chr14:78737743-78737744
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1004667	0.82[EUR][1000 genomes]
rs10147289	0.95[CEU][hapmap];0.85[GIH][hapmap];0.87[TSI][hapmap];0.93[EUR][1000 genomes]
rs10147843	0.95[CEU][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11159350	0.81[GIH][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs1523131	0.81[GIH][hapmap];0.91[MKK][hapmap];0.86[TSI][hapmap];0.86[EUR][1000 genomes]
rs1882809	0.82[EUR][1000 genomes]
rs1882811	0.81[CEU][hapmap];0.82[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1882812	0.81[GIH][hapmap];0.86[TSI][hapmap];0.85[EUR][1000 genomes]
rs1882815	0.85[EUR][1000 genomes]
rs2205164	0.81[GIH][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs4503718	0.85[EUR][1000 genomes]
rs4903733	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4903735	0.86[CEU][hapmap];0.83[EUR][1000 genomes]
rs4903739	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4903743	0.85[EUR][1000 genomes]
rs8021038	0.82[MKK][hapmap];0.86[TSI][hapmap];0.85[EUR][1000 genomes]
rs909199	0.83[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78731400-78748200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:78731600-78737800	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr14:78736600-78738000	Enhancers	Brain Anterior Caudate	brain
5	chr14:78736600-78738200	Enhancers	Brain Substantia Nigra	brain
6	chr14:78736800-78737800	Weak transcription	Brain Germinal Matrix	brain
7	chr14:78737000-78737800	Weak transcription	Brain Hippocampus Middle	brain
8	chr14:78737200-78738800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr14:78737400-78738600	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr14:78737600-78738800	Enhancers	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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