Variant report

Variant	rs909199
Chromosome Location	chr14:78743434-78743435
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1004667	0.94[ASN][1000 genomes]
rs10147289	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10147843	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1882809	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4903733	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4903735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7152608	0.82[EUR][1000 genomes]
rs926099	0.83[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78731400-78748200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:78738600-78778200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:78738600-78779000	Weak transcription	Brain Angular Gyrus	brain
5	chr14:78739000-78744400	Weak transcription	Brain Germinal Matrix	brain
6	chr14:78743400-78743800	Enhancers	Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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