Variant report

Variant	rs4958320
Chromosome Location	chr5:151964215-151964216
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:73)

rs_ID	r²[population]
rs10155517	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10515675	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10515676	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11167584	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11956651	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12188564	0.88[EUR][1000 genomes]
rs13359939	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13361438	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17452991	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17453481	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17453530	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17453740	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17453775	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17453880	0.81[AMR][1000 genomes]
rs17454420	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17455800	0.83[EUR][1000 genomes]
rs17550343	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17565365	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17565470	0.83[EUR][1000 genomes]
rs17565505	0.81[EUR][1000 genomes]
rs17565693	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2961756	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2961760	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2961765	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2961766	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2964230	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2964231	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3923209	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4246033	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4398624	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4406125	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4478308	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4484412	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4557395	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4580766	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4958316	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4958317	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4958323	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4958537	1.00[JPT][hapmap]
rs4958560	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4958561	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4958562	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4958564	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4958566	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4958567	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4958568	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4958569	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55648729	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55786399	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56014830	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57358310	0.81[AMR][1000 genomes]
rs67979431	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6871699	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6871986	0.81[AMR][1000 genomes]
rs6876403	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6876723	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6884556	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6895969	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72795376	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72795379	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72795389	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72797226	1.00[ASN][1000 genomes]
rs72797233	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72797237	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72797241	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72797243	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72797251	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72797254	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72797262	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72797296	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72799113	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9324734	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs982716	1.00[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151963200-151964600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr5:151963200-151964600	Enhancers	Brain Anterior Caudate	brain
3	chr5:151963400-151964400	Enhancers	Brain Cingulate Gyrus	brain
4	chr5:151963400-151964600	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr5:151963400-151964600	Enhancers	Brain Substantia Nigra	brain
6	chr5:151963800-151964600	Enhancers	Brain Hippocampus Middle	brain

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