Variant report

Variant	rs5014408
Chromosome Location	chr3:86105983-86105984
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11127909	1.00[CEU][hapmap]
rs11927233	1.00[CEU][hapmap]
rs17024815	0.87[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes]
rs4629352	1.00[CEU][hapmap]
rs73134192	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73136126	0.91[EUR][1000 genomes]
rs73136130	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73136141	1.00[EUR][1000 genomes]
rs73136146	1.00[EUR][1000 genomes]
rs73136158	1.00[EUR][1000 genomes]
rs7430551	1.00[CEU][hapmap]
rs7434109	0.83[YRI][hapmap]
rs9784262	0.86[LWK][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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