Variant report

Variant	rs73136130
Chromosome Location	chr3:86099986-86099987
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11927233	0.81[EUR][1000 genomes]
rs17024815	0.89[AFR][1000 genomes]
rs73134138	0.81[EUR][1000 genomes]
rs73134140	0.81[EUR][1000 genomes]
rs73134148	0.81[EUR][1000 genomes]
rs73134155	0.81[EUR][1000 genomes]
rs73134159	0.81[EUR][1000 genomes]
rs73134162	0.81[EUR][1000 genomes]
rs73134176	0.81[EUR][1000 genomes]
rs73134181	0.81[EUR][1000 genomes]
rs73134182	0.81[EUR][1000 genomes]
rs73134184	0.81[EUR][1000 genomes]
rs73134192	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73136126	1.00[EUR][1000 genomes]
rs73136141	0.91[EUR][1000 genomes]
rs73136146	0.91[EUR][1000 genomes]
rs73136158	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86099800-86101000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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