Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11927233	1.00[EUR][1000 genomes]
rs73132617	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73132625	0.83[AMR][1000 genomes]
rs73134138	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134140	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134148	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134155	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134159	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134162	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134182	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73134192	1.00[EUR][1000 genomes]
rs73134197	0.90[EUR][1000 genomes]
rs73136126	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73136130	0.81[EUR][1000 genomes]
rs73136141	1.00[AMR][1000 genomes]
rs73136146	1.00[AMR][1000 genomes]
rs73136158	1.00[AMR][1000 genomes]
rs73138178	1.00[AMR][1000 genomes]
rs73138180	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73138198	1.00[AMR][1000 genomes]
rs73147162	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv877112	chr3:85964737-86083716	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86040400-86064000	Weak transcription	Brain Hippocampus Middle	brain
2	chr3:86055600-86056800	Weak transcription	Colon Smooth Muscle	Colon

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