Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs73132617	0.83[AMR][1000 genomes]
rs73132625	0.83[AMR][1000 genomes]
rs73134138	0.83[AMR][1000 genomes]
rs73134140	0.83[AMR][1000 genomes]
rs73134148	1.00[AMR][1000 genomes]
rs73134155	0.83[AMR][1000 genomes]
rs73134159	0.83[AMR][1000 genomes]
rs73134162	1.00[AMR][1000 genomes]
rs73134176	1.00[AMR][1000 genomes]
rs73134181	1.00[AMR][1000 genomes]
rs73134182	1.00[AMR][1000 genomes]
rs73134184	1.00[AMR][1000 genomes]
rs73136126	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73136130	0.91[EUR][1000 genomes]
rs73136141	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73136158	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73138178	1.00[AMR][1000 genomes]
rs73138180	1.00[AMR][1000 genomes]
rs73138198	1.00[AMR][1000 genomes]
rs73147162	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86111000-86119600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr3:86115000-86117200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr3:86115800-86118600	Weak transcription	Brain Cingulate Gyrus	brain

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