Variant report

Variant	rs511729
Chromosome Location	chr18:40350740-40350741
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2622327	1.00[YRI][hapmap]
rs2622328	0.87[YRI][hapmap]
rs480519	1.00[YRI][hapmap]
rs483520	0.89[YRI][hapmap]
rs487851	0.89[YRI][hapmap]
rs488727	0.88[YRI][hapmap]
rs495065	0.88[YRI][hapmap]
rs522755	1.00[ASW][hapmap]
rs607455	0.89[YRI][hapmap]
rs612241	0.86[YRI][hapmap]
rs618537	0.89[YRI][hapmap]
rs659129	1.00[ASW][hapmap];0.92[LWK][hapmap];0.88[YRI][hapmap]
rs662508	1.00[YRI][hapmap]
rs670649	1.00[YRI][hapmap]
rs674340	0.88[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833632	chr18:40187679-40388058	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1056794	chr18:40197837-40688514	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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