The 2.0 version of rSNPBase

Variant report

Variant rs551461
Chromosome Location chr7:112531449-112531450
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:112468600-112550000 Weak transcription Aorta Aorta
2 chr7:112470800-112533200 Weak transcription HSMM muscle
3 chr7:112471800-112545200 Weak transcription Ovary ovary
4 chr7:112472600-112533200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr7:112490800-112533000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr7:112494200-112532400 Weak transcription Primary T cells fromperipheralblood blood
7 chr7:112496200-112533400 Weak transcription Stomach Smooth Muscle stomach
8 chr7:112506800-112533000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr7:112507400-112556800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr7:112509400-112532400 Weak transcription Dnd41 blood
11 chr7:112512800-112533400 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr7:112513800-112533200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr7:112515200-112534000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr7:112515400-112533000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr7:112515400-112533400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr7:112515400-112551000 Weak transcription Placenta Amnion Placenta Amnion
17 chr7:112516000-112533000 Weak transcription Fetal Kidney kidney
18 chr7:112516000-112533200 Weak transcription Fetal Brain Male brain
19 chr7:112516000-112537800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr7:112516400-112551000 Weak transcription Brain Cingulate Gyrus brain
21 chr7:112518000-112533000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr7:112518000-112533400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr7:112518000-112534200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr7:112518800-112533000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr7:112519000-112532800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr7:112519000-112557400 Weak transcription Muscle Satellite Cultured Cells --
27 chr7:112519200-112532200 Weak transcription Fetal Lung lung
28 chr7:112519400-112533400 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr7:112520200-112533200 Weak transcription Osteobl bone
30 chr7:112521400-112533000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr7:112521400-112534600 Weak transcription Esophagus oesophagus
32 chr7:112521600-112533000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr7:112521600-112535600 Weak transcription HSMMtube muscle
34 chr7:112522200-112533200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr7:112522200-112571000 Weak transcription Thymus Thymus
36 chr7:112522400-112532000 Weak transcription Fetal Muscle Trunk muscle
37 chr7:112522400-112532400 Weak transcription Fetal Muscle Leg muscle
38 chr7:112522400-112532800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr7:112522400-112533200 Weak transcription Pancreas Pancrea
40 chr7:112522400-112534400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr7:112522400-112551000 Weak transcription Spleen Spleen
42 chr7:112522400-112558400 Weak transcription Gastric stomach
43 chr7:112522400-112558800 Weak transcription Lung lung
44 chr7:112522800-112533200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr7:112523800-112533200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr7:112524200-112539400 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr7:112524200-112550800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr7:112524200-112556800 Weak transcription Colonic Mucosa Colon
49 chr7:112524800-112533000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr7:112524800-112538600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015