The 2.0 version of rSNPBase

Variant report

Variant rs55641345
Chromosome Location chr8:2076049-2076050
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:2074400-2076200 Weak transcription Fetal Heart heart
2 chr8:2074400-2076400 Active TSS Stomach Smooth Muscle stomach
3 chr8:2074800-2076200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr8:2074800-2076200 Active TSS Duodenum Mucosa Duodenum
5 chr8:2074800-2076400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr8:2074800-2076400 Active TSS Fetal Lung lung
7 chr8:2074800-2076600 Active TSS Brain Inferior Temporal Lobe brain
8 chr8:2074800-2076600 Active TSS Rectal Mucosa Donor 29 rectum
9 chr8:2075000-2076200 Active TSS ES-WA7 Cell Line embryonic stem cell
10 chr8:2075000-2076200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr8:2075000-2076200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
12 chr8:2075000-2076200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr8:2075000-2076200 Active TSS iPS-20b Cell Line embryonic stem cell
14 chr8:2075000-2076200 Active TSS Primary T killer memory cells from peripheral blood blood
15 chr8:2075000-2076200 Active TSS Muscle Satellite Cultured Cells --
16 chr8:2075000-2076200 Active TSS Fetal Brain Female brain
17 chr8:2075000-2076200 Active TSS Pancreatic Islets Pancreatic Islet
18 chr8:2075000-2076400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
19 chr8:2075000-2076400 Active TSS Fetal Kidney kidney
20 chr8:2075000-2076400 Active TSS Rectal Mucosa Donor 31 rectum
21 chr8:2075000-2076400 Active TSS NHDF-Ad bronchial
22 chr8:2075000-2076600 Active TSS Primary B cells from cord blood blood
23 chr8:2075200-2076200 Active TSS Monocytes-CD14+_RO01746 blood
24 chr8:2075200-2076400 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr8:2075200-2076400 Active TSS GM12878-XiMat blood
26 chr8:2075200-2076400 Active TSS NHLF lung
27 chr8:2075200-2076600 Active TSS Fetal Brain Male brain
28 chr8:2075400-2076200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr8:2075400-2076200 Active TSS Primary monocytes fromperipheralblood blood
30 chr8:2075400-2076200 Active TSS Primary T cells fromperipheralblood blood
31 chr8:2075400-2076200 Active TSS Primary hematopoietic stem cells short term culture blood
32 chr8:2075400-2076200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr8:2075400-2076200 Active TSS Primary T helper naive cells fromperipheralblood blood
34 chr8:2075400-2076200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr8:2075400-2076200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr8:2075400-2076200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr8:2075400-2076200 Active TSS Liver Liver
38 chr8:2075400-2076200 Active TSS Fetal Adrenal Gland Adrenal Gland
39 chr8:2075400-2076200 Active TSS Fetal Muscle Leg muscle
40 chr8:2075400-2076200 Active TSS Fetal Stomach stomach
41 chr8:2075400-2076200 Active TSS Fetal Thymus thymus
42 chr8:2075400-2076200 Active TSS Dnd41 blood
43 chr8:2075400-2076200 Active TSS HSMMtube muscle
44 chr8:2075400-2076200 Active TSS NH-A brain
45 chr8:2075400-2076400 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr8:2075400-2076400 Active TSS Primary Natural Killer cells fromperipheralblood blood
47 chr8:2075400-2076400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr8:2075400-2076400 Active TSS Adipose Nuclei Adipose
49 chr8:2075400-2076400 Active TSS A549 lung
50 chr8:2075400-2076400 Active TSS HUVEC blood vessel

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Last update: Aug 31, 2015