The 2.0 version of rSNPBase

Variant report

Variant rs62480006
Chromosome Location chr8:2085168-2085169
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:2075600-2092600 Weak transcription Esophagus oesophagus
2 chr8:2075800-2086200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr8:2075800-2091400 Weak transcription Gastric stomach
4 chr8:2076000-2085200 Weak transcription Brain Anterior Caudate brain
5 chr8:2076000-2085200 Weak transcription Fetal Muscle Trunk muscle
6 chr8:2076000-2087000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr8:2076000-2092800 Weak transcription Brain Angular Gyrus brain
8 chr8:2076000-2093400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr8:2076000-2094400 Weak transcription Brain Hippocampus Middle brain
10 chr8:2076000-2109600 Weak transcription Right Atrium heart
11 chr8:2076200-2085200 Weak transcription Liver Liver
12 chr8:2076200-2092400 Weak transcription HSMMtube muscle
13 chr8:2076400-2086600 Weak transcription Stomach Smooth Muscle stomach
14 chr8:2076400-2097800 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr8:2076600-2092800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr8:2076600-2096800 Strong transcription Skeletal Muscle Male skeletal muscle
17 chr8:2078200-2089600 Weak transcription Psoas Muscle Psoas
18 chr8:2079400-2094600 Weak transcription Fetal Heart heart
19 chr8:2079400-2095800 Enhancers Primary T helper cells fromperipheralblood blood
20 chr8:2079600-2093600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr8:2079800-2093400 Weak transcription Primary hematopoietic stem cells blood
22 chr8:2080400-2087800 Strong transcription Fetal Muscle Leg muscle
23 chr8:2080800-2096800 Strong transcription Left Ventricle heart
24 chr8:2081000-2087400 Weak transcription Thymus Thymus
25 chr8:2081200-2085200 Weak transcription Pancreas Pancrea
26 chr8:2081200-2089200 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr8:2082400-2091400 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr8:2082400-2093200 Enhancers Primary T helper cells PMA-I stimulated --
29 chr8:2082600-2092400 Weak transcription Aorta Aorta
30 chr8:2083600-2087200 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr8:2083600-2087200 Weak transcription Fetal Thymus thymus
32 chr8:2083600-2087800 Strong transcription Right Ventricle heart
33 chr8:2084000-2086200 Strong transcription Spleen Spleen
34 chr8:2084200-2086400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr8:2084200-2086800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr8:2084200-2087600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr8:2084400-2085200 Weak transcription Primary T cells from cord blood blood
38 chr8:2084400-2085400 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr8:2084400-2086600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr8:2084400-2086800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr8:2084400-2091400 Enhancers Primary T cells fromperipheralblood blood
42 chr8:2084600-2085400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr8:2084600-2087200 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr8:2084600-2087400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr8:2085000-2085600 Enhancers Brain Inferior Temporal Lobe brain
46 chr8:2085000-2085800 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr8:2085000-2086200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr8:2085000-2086400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015