The 2.0 version of rSNPBase

Variant report

Variant rs3824178
Chromosome Location chr8:2079320-2079321
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:2075400-2084000 Weak transcription Spleen Spleen
2 chr8:2075600-2092600 Weak transcription Esophagus oesophagus
3 chr8:2075800-2080800 Weak transcription Pancreas Pancrea
4 chr8:2075800-2086200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr8:2075800-2091400 Weak transcription Gastric stomach
6 chr8:2076000-2082400 Weak transcription Aorta Aorta
7 chr8:2076000-2085200 Weak transcription Brain Anterior Caudate brain
8 chr8:2076000-2085200 Weak transcription Fetal Muscle Trunk muscle
9 chr8:2076000-2087000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr8:2076000-2092800 Weak transcription Brain Angular Gyrus brain
11 chr8:2076000-2093400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr8:2076000-2094400 Weak transcription Brain Hippocampus Middle brain
13 chr8:2076000-2109600 Weak transcription Right Atrium heart
14 chr8:2076200-2083600 Enhancers Fetal Thymus thymus
15 chr8:2076200-2085200 Weak transcription Liver Liver
16 chr8:2076200-2092400 Weak transcription HSMMtube muscle
17 chr8:2076400-2086600 Weak transcription Stomach Smooth Muscle stomach
18 chr8:2076400-2097800 Strong transcription Skeletal Muscle Female skeletal muscle
19 chr8:2076600-2079600 Strong transcription Fetal Muscle Leg muscle
20 chr8:2076600-2085000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr8:2076600-2092800 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr8:2076600-2096800 Strong transcription Skeletal Muscle Male skeletal muscle
23 chr8:2076800-2079400 Strong transcription Left Ventricle heart
24 chr8:2077400-2079600 Enhancers Dnd41 blood
25 chr8:2078200-2083600 Weak transcription Right Ventricle heart
26 chr8:2078200-2085000 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr8:2078200-2089600 Weak transcription Psoas Muscle Psoas
28 chr8:2078400-2079800 Enhancers Primary hematopoietic stem cells blood
29 chr8:2078600-2079400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr8:2078600-2079400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr8:2078600-2079600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
32 chr8:2078600-2079600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr8:2078600-2079600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
34 chr8:2078600-2079600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr8:2078800-2079400 Flanking Active TSS Primary T cells fromperipheralblood blood
36 chr8:2078800-2079400 Strong transcription Fetal Heart heart
37 chr8:2078800-2079600 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr8:2078800-2079600 Enhancers Primary mononuclear cells fromperipheralblood Blood
39 chr8:2079000-2079400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr8:2079000-2079400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr8:2079000-2079400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
42 chr8:2079000-2079400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
43 chr8:2079000-2079400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
44 chr8:2079000-2079400 Enhancers Placenta Amnion Placenta Amnion
45 chr8:2079000-2079600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr8:2079000-2079600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr8:2079000-2079600 Enhancers Primary B cells from peripheral blood blood
48 chr8:2079000-2079600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
49 chr8:2079000-2079600 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr8:2079200-2079400 Enhancers Primary T cells from cord blood blood

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Last update: Aug 31, 2015