The 2.0 version of rSNPBase

Variant report

Variant rs55654731
Chromosome Location chr1:211515070-211515071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211501200-211515200 Enhancers Sigmoid Colon Sigmoid Colon
2 chr1:211502400-211519000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:211502600-211519000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:211505000-211518800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr1:211505000-211530200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:211505800-211529800 Weak transcription Ovary ovary
7 chr1:211506000-211517200 Weak transcription Fetal Lung lung
8 chr1:211506000-211518800 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:211506200-211517400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:211506600-211515200 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr1:211506600-211516800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr1:211507800-211519000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:211508000-211515200 Enhancers Pancreas Pancrea
14 chr1:211508400-211519000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:211509200-211518800 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr1:211509400-211516600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:211509400-211519000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:211509600-211515400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr1:211509600-211519000 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:211509800-211515200 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr1:211509800-211517200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr1:211509800-211517800 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr1:211509800-211518800 Weak transcription H1 Cell Line embryonic stem cell
24 chr1:211509800-211521600 Enhancers Primary T helper cells fromperipheralblood blood
25 chr1:211509800-211529200 Weak transcription Rectal Smooth Muscle rectum
26 chr1:211509800-211544200 Weak transcription HUVEC blood vessel
27 chr1:211510400-211520800 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:211510800-211516600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr1:211510800-211524000 Genic enhancers Primary B cells from peripheral blood blood
31 chr1:211511200-211517200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:211511200-211518800 Weak transcription Colon Smooth Muscle Colon
33 chr1:211511400-211515200 Genic enhancers Primary T cells from cord blood blood
34 chr1:211511400-211528600 Weak transcription Right Atrium heart
35 chr1:211511600-211533000 Weak transcription Left Ventricle heart
36 chr1:211511800-211518800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:211512200-211515400 Enhancers Rectal Mucosa Donor 31 rectum
38 chr1:211512200-211521600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr1:211512800-211515200 Enhancers Colonic Mucosa Colon
40 chr1:211513000-211517200 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr1:211513200-211515600 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr1:211513200-211516600 Weak transcription Thymus Thymus
43 chr1:211513200-211518400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:211513200-211518800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:211513200-211520800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:211513200-211526600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:211513400-211516200 Weak transcription Primary hematopoietic stem cells blood
48 chr1:211513400-211516800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:211513400-211517400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:211513400-211517600 Weak transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015