The 2.0 version of rSNPBase

Variant report

Variant rs61851029
Chromosome Location chr1:211503548-211503549
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211500400-211504000 Flanking Active TSS Primary B cells from cord blood blood
2 chr1:211500800-211503600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
3 chr1:211500800-211503600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
4 chr1:211500800-211503600 Flanking Active TSS Duodenum Mucosa Duodenum
5 chr1:211501000-211503600 Flanking Active TSS Primary T cells fromperipheralblood blood
6 chr1:211501000-211503600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
7 chr1:211501000-211503600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
8 chr1:211501000-211504000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:211501200-211503800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:211501200-211504000 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:211501200-211504000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr1:211501200-211504200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
13 chr1:211501200-211504200 Enhancers Esophagus oesophagus
14 chr1:211501200-211504200 Enhancers Placenta Placenta
15 chr1:211501200-211505400 Weak transcription Brain Angular Gyrus brain
16 chr1:211501200-211505400 Weak transcription Brain Hippocampus Middle brain
17 chr1:211501200-211509200 Weak transcription Fetal Kidney kidney
18 chr1:211501200-211511000 Enhancers Stomach Mucosa stomach
19 chr1:211501200-211515200 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:211501400-211503600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:211501400-211503800 Weak transcription Fetal Intestine Small intestine
22 chr1:211501400-211504200 Enhancers Primary hematopoietic stem cells blood
23 chr1:211501400-211505200 Weak transcription Psoas Muscle Psoas
24 chr1:211501400-211505400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:211501400-211505400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr1:211501400-211505400 Weak transcription HUVEC blood vessel
27 chr1:211501400-211505600 Weak transcription A549 lung
28 chr1:211501400-211505800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:211501400-211506200 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:211501600-211503800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr1:211501600-211504200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:211501600-211504400 Flanking Active TSS GM12878-XiMat blood
33 chr1:211501600-211504600 Enhancers Gastric stomach
34 chr1:211501600-211505200 Enhancers HUES64 Cell Line embryonic stem cell
35 chr1:211501600-211506600 Enhancers Colon Smooth Muscle Colon
36 chr1:211501800-211503600 Enhancers Skeletal Muscle Male skeletal muscle
37 chr1:211501800-211503800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:211501800-211504000 Weak transcription Osteobl bone
39 chr1:211501800-211505000 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr1:211501800-211505400 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:211501800-211505600 Weak transcription Brain Anterior Caudate brain
42 chr1:211502000-211503600 Enhancers HUES6 Cell Line embryonic stem cell
43 chr1:211502000-211504000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:211502000-211504400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:211502000-211505200 Weak transcription Right Atrium heart
46 chr1:211502000-211505400 Weak transcription Left Ventricle heart
47 chr1:211502200-211503600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr1:211502200-211503600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
49 chr1:211502200-211504200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:211502200-211504200 Enhancers Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015