Variant report

Variant	rs55677609
Chromosome Location	chr2:160928122-160928123
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10497212	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12478287	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16844742	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4076843	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4595921	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4665146	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4665154	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs55759330	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60915384	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72967898	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72969807	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72969809	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72975471	0.85[AMR][1000 genomes]
rs72975474	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72978513	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72978520	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72978527	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7573469	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:160921000-160930200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr2:160927200-160934600	Weak transcription	Placenta	Placenta
3	chr2:160928000-160928200	Enhancers	Fetal Intestine Large	intestine
4	chr2:160928000-160928200	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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