Variant report

Variant	rs72978527
Chromosome Location	chr2:160928319-160928320
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:160928221..160929851-chr2:160929871..160931869,2	MCF-7	breast:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10497212	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12478287	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844742	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844790	0.83[EUR][1000 genomes]
rs16844802	0.83[EUR][1000 genomes]
rs17284082	0.80[EUR][1000 genomes]
rs34347603	0.84[EUR][1000 genomes]
rs4076843	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4078235	0.83[EUR][1000 genomes]
rs4595921	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4665146	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4665154	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4665156	0.81[EUR][1000 genomes]
rs55677609	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55759330	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60915384	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72967898	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72969807	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72969809	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72975471	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72975474	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72977408	0.83[EUR][1000 genomes]
rs72978513	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72978520	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72979930	0.81[EUR][1000 genomes]
rs7573469	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:160921000-160930200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr2:160927200-160934600	Weak transcription	Placenta	Placenta
3	chr2:160928200-160929200	Weak transcription	Fetal Intestine Large	intestine
4	chr2:160928200-160929200	Weak transcription	Fetal Intestine Small	intestine

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