Variant report
| Variant | rs55699566 |
|---|---|
| Chromosome Location | chr12:42593300-42593301 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42539800-42607800 | Weak transcription | Pancreas | Pancrea |
| 2 | chr12:42547800-42610400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 3 | chr12:42550600-42615800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 4 | chr12:42552000-42604000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr12:42552200-42613000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 6 | chr12:42552400-42620000 | Weak transcription | Fetal Brain Female | brain |
| 7 | chr12:42554000-42607600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr12:42555000-42628600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr12:42555400-42598000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 10 | chr12:42556800-42613200 | Weak transcription | HMEC | breast |
| 11 | chr12:42557000-42604000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 12 | chr12:42557200-42606800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 13 | chr12:42558000-42602400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 14 | chr12:42563200-42608000 | Weak transcription | Small Intestine | intestine |
| 15 | chr12:42568400-42623400 | Weak transcription | K562 | blood |
| 16 | chr12:42568600-42607800 | Weak transcription | Right Ventricle | heart |
| 17 | chr12:42568800-42630600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr12:42569600-42630800 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr12:42569800-42631000 | Weak transcription | Gastric | stomach |
| 20 | chr12:42571400-42597600 | Weak transcription | Esophagus | oesophagus |
| 21 | chr12:42571600-42602400 | Weak transcription | HepG2 | liver |
| 22 | chr12:42574800-42615600 | Weak transcription | HUVEC | blood vessel |
| 23 | chr12:42575600-42607800 | Weak transcription | Brain Angular Gyrus | brain |
| 24 | chr12:42575600-42628600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr12:42575800-42607800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 26 | chr12:42575800-42607800 | Weak transcription | Brain Substantia Nigra | brain |
| 27 | chr12:42576600-42607800 | Weak transcription | Brain Anterior Caudate | brain |
| 28 | chr12:42578000-42606400 | Weak transcription | Fetal Heart | heart |
| 29 | chr12:42578800-42603600 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr12:42579200-42606800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 31 | chr12:42581800-42607800 | Weak transcription | Ovary | ovary |
| 32 | chr12:42582000-42596000 | Weak transcription | NHEK | skin |
| 33 | chr12:42582200-42602000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 34 | chr12:42583800-42606800 | Weak transcription | HSMM | muscle |
| 35 | chr12:42584400-42594600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 36 | chr12:42585200-42593400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr12:42585200-42596400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 38 | chr12:42585200-42608000 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr12:42585400-42595400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 40 | chr12:42585600-42604600 | Weak transcription | Fetal Brain Male | brain |
| 41 | chr12:42586000-42593400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 42 | chr12:42586200-42593600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 43 | chr12:42586400-42603800 | Weak transcription | NH-A | brain |
| 44 | chr12:42586800-42630000 | Weak transcription | Fetal Kidney | kidney |
| 45 | chr12:42587200-42607800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 46 | chr12:42587200-42629600 | Weak transcription | Lung | lung |
| 47 | chr12:42587400-42597800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 48 | chr12:42587400-42620000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 49 | chr12:42587600-42606800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 50 | chr12:42587800-42619400 | Weak transcription | Fetal Lung | lung |
