Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12562303	0.87[ASN][1000 genomes]
rs12562536	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12563193	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12565452	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12566234	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1538755	1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2022442	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4951576	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4951591	0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs56849437	0.85[ASN][1000 genomes]
rs57144255	0.85[ASN][1000 genomes]
rs59441822	0.87[ASN][1000 genomes]
rs59843981	0.86[ASN][1000 genomes]
rs74156043	0.84[ASN][1000 genomes]
rs74156047	1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs74156054	0.84[AFR][1000 genomes]
rs74156055	0.84[AFR][1000 genomes]
rs74156059	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs74156061	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs74156063	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74156064	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9430047	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9430049	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873148	chr1:210665583-210994339	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv873153	chr1:210900481-210994339	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv999018	chr1:210907239-210999306	Genic enhancers Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210871200-210932000	Weak transcription	HSMM	muscle
2	chr1:210903800-210919200	Weak transcription	HSMMtube	muscle
3	chr1:210905600-210921200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr1:210910600-210921200	Weak transcription	Brain Angular Gyrus	brain

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