Variant report

Variant rs55755794
Chromosome Location chr19:56977303-56977304
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56957200-56987400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr19:56957400-56985000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
3 chr19:56957400-56987400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
4 chr19:56957400-56987400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:56965800-56977400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
6 chr19:56966400-56979800 ZNF genes & repeats Ovary ovary
7 chr19:56967200-56987600 Weak transcription Fetal Heart heart
8 chr19:56969400-56987600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr19:56970200-56981400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr19:56972800-56987600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:56973000-56981400 Weak transcription H1 Cell Line embryonic stem cell
12 chr19:56973000-56981600 Weak transcription Placenta Amnion Placenta Amnion
13 chr19:56973200-56981000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr19:56973400-56981600 Weak transcription Psoas Muscle Psoas
15 chr19:56973400-56983600 Weak transcription Dnd41 blood
16 chr19:56973600-56981800 Weak transcription Left Ventricle heart
17 chr19:56974000-56981000 Weak transcription Fetal Muscle Trunk muscle
18 chr19:56974000-56981400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr19:56974000-56981600 Weak transcription Right Ventricle heart
20 chr19:56975600-56978200 ZNF genes & repeats Liver Liver
21 chr19:56975600-56978600 ZNF genes & repeats Fetal Brain Female brain
22 chr19:56975600-56979600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
23 chr19:56975600-56985200 ZNF genes & repeats Brain Germinal Matrix brain
24 chr19:56975600-56987200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
25 chr19:56975800-56978200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
26 chr19:56976400-56979800 Weak transcription Brain Cingulate Gyrus brain
27 chr19:56976600-56977600 Enhancers Brain Anterior Caudate brain
28 chr19:56976800-56978200 ZNF genes & repeats Fetal Brain Male brain
29 chr19:56976800-56987200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
30 chr19:56977000-56978200 ZNF genes & repeats Aorta Aorta
31 chr19:56977000-56978200 Weak transcription Stomach Smooth Muscle stomach
32 chr19:56977000-56980000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
33 chr19:56977200-56978200 ZNF genes & repeats Skeletal Muscle Female skeletal muscle

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