Variant report

Variant rs55902154
Chromosome Location chr11:8794823-8794824
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8777400-8795800 Enhancers Rectal Smooth Muscle rectum
2 chr11:8779600-8799600 Weak transcription Fetal Brain Male brain
3 chr11:8785200-8799400 Enhancers Fetal Heart heart
4 chr11:8786600-8795400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
5 chr11:8786600-8795400 Enhancers Stomach Mucosa stomach
6 chr11:8786600-8798000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr11:8786600-8803000 Enhancers Ovary ovary
8 chr11:8787000-8797800 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr11:8787600-8795000 Weak transcription Fetal Intestine Large intestine
10 chr11:8788200-8797000 Weak transcription Brain Hippocampus Middle brain
11 chr11:8788600-8799600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr11:8788800-8801400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr11:8788800-8808400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr11:8789000-8795400 Enhancers HMEC breast
15 chr11:8789000-8801200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr11:8789400-8797000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:8789400-8797400 Weak transcription Brain Substantia Nigra brain
18 chr11:8789400-8807600 Weak transcription Fetal Kidney kidney
19 chr11:8789600-8799400 Weak transcription Brain Cingulate Gyrus brain
20 chr11:8789600-8805800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr11:8790400-8795600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr11:8790400-8795800 Weak transcription Small Intestine intestine
23 chr11:8790600-8796000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:8790800-8795000 Weak transcription Duodenum Mucosa Duodenum
25 chr11:8790800-8797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr11:8791400-8795600 Weak transcription Fetal Thymus thymus
27 chr11:8791400-8797000 Weak transcription Psoas Muscle Psoas
28 chr11:8791400-8810400 Weak transcription Hela-S3 cervix
29 chr11:8791600-8796200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr11:8792200-8795400 Enhancers NHDF-Ad bronchial
31 chr11:8792200-8795600 Enhancers NHEK skin
32 chr11:8792400-8795200 Enhancers Osteobl bone
33 chr11:8792400-8795400 Enhancers Muscle Satellite Cultured Cells --
34 chr11:8792400-8795600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr11:8792400-8795600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr11:8792400-8795800 Genic enhancers Cortex derived primary cultured neurospheres brain
37 chr11:8792400-8796000 Genic enhancers HSMM muscle
38 chr11:8792400-8796400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:8792400-8797000 Enhancers Colon Smooth Muscle Colon
40 chr11:8792600-8795200 Enhancers NH-A brain
41 chr11:8792600-8802400 Genic enhancers Fetal Stomach stomach
42 chr11:8792800-8795200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr11:8793000-8795000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr11:8793000-8797600 Enhancers NHLF lung
45 chr11:8793000-8798000 Weak transcription Liver Liver
46 chr11:8793200-8795000 Enhancers HSMMtube muscle
47 chr11:8793200-8801600 Genic enhancers Fetal Muscle Leg muscle
48 chr11:8793800-8795200 Enhancers Placenta Placenta
49 chr11:8794000-8795000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr11:8794000-8795200 Enhancers Duodenum Smooth Muscle Duodenum

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