Variant report

Variant rs55997441
Chromosome Location chr22:31627989-31627990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31608800-31639800 Weak transcription Aorta Aorta
2 chr22:31609200-31629000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr22:31609600-31639200 Weak transcription H1 Cell Line embryonic stem cell
4 chr22:31609800-31629400 Weak transcription Placenta Amnion Placenta Amnion
5 chr22:31615200-31629000 Weak transcription NH-A brain
6 chr22:31620200-31637200 Weak transcription HSMM muscle
7 chr22:31620800-31630000 Weak transcription Brain Angular Gyrus brain
8 chr22:31621400-31628200 Genic enhancers HepG2 liver
9 chr22:31621600-31629600 Genic enhancers Fetal Intestine Small intestine
10 chr22:31622200-31636800 Weak transcription Hela-S3 cervix
11 chr22:31622600-31637400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr22:31623800-31632800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
13 chr22:31624600-31630000 Enhancers Skeletal Muscle Female skeletal muscle
14 chr22:31624800-31628000 Enhancers Primary T helper cells fromperipheralblood blood
15 chr22:31624800-31630000 Enhancers Placenta Placenta
16 chr22:31625000-31629800 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr22:31625200-31628400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr22:31625400-31628000 Enhancers Skeletal Muscle Male skeletal muscle
19 chr22:31625400-31629200 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr22:31625600-31628000 Enhancers Brain Hippocampus Middle brain
21 chr22:31625600-31639800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr22:31625800-31629200 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr22:31625800-31636000 Weak transcription Ovary ovary
24 chr22:31625800-31637000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr22:31625800-31637000 Weak transcription HMEC breast
26 chr22:31625800-31639600 Weak transcription Esophagus oesophagus
27 chr22:31626000-31628400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr22:31626000-31629000 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr22:31626000-31629000 Weak transcription Muscle Satellite Cultured Cells --
30 chr22:31626000-31629000 Weak transcription NHEK skin
31 chr22:31626000-31637200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr22:31626000-31637400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr22:31626400-31629000 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr22:31626400-31629000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr22:31626400-31629000 Weak transcription Thymus Thymus
36 chr22:31626400-31630800 Enhancers HUVEC blood vessel
37 chr22:31626400-31635000 Weak transcription Gastric stomach
38 chr22:31626600-31628600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr22:31626600-31631000 Enhancers Primary hematopoietic stem cells blood
40 chr22:31626600-31632400 Enhancers Primary monocytes fromperipheralblood blood
41 chr22:31626600-31639800 Weak transcription NHDF-Ad bronchial
42 chr22:31626600-31643800 Weak transcription Left Ventricle heart
43 chr22:31626600-31643800 Weak transcription Spleen Spleen
44 chr22:31626800-31628000 Strong transcription Dnd41 blood
45 chr22:31626800-31628400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr22:31626800-31629800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr22:31626800-31639600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr22:31627000-31629000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr22:31627000-31629200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr22:31627000-31631000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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