The 2.0 version of rSNPBase

Variant report

Variant rs56064477
Chromosome Location chr1:173848095-173848096
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173838200-173854200 Weak transcription Gastric stomach
2 chr1:173838200-173866000 Weak transcription Small Intestine intestine
3 chr1:173838400-173854200 Weak transcription Esophagus oesophagus
4 chr1:173838400-173854800 Weak transcription Aorta Aorta
5 chr1:173838400-173854800 Weak transcription Right Ventricle heart
6 chr1:173838400-173860200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:173838600-173854800 Weak transcription Rectal Smooth Muscle rectum
8 chr1:173838800-173855800 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:173839000-173848400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:173839000-173850000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:173839000-173854800 Weak transcription Colon Smooth Muscle Colon
12 chr1:173839000-173862800 Weak transcription HMEC breast
13 chr1:173839200-173850000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:173839200-173855000 Weak transcription A549 lung
15 chr1:173839400-173849200 Strong transcription Fetal Stomach stomach
16 chr1:173839400-173850000 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr1:173839600-173854600 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:173840200-173849600 Strong transcription Placenta Placenta
19 chr1:173840200-173854200 Weak transcription Colonic Mucosa Colon
20 chr1:173840200-173854800 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:173840200-173856800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:173840400-173855000 Weak transcription Psoas Muscle Psoas
23 chr1:173840600-173849400 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:173840600-173854200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:173840800-173848400 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr1:173840800-173854200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:173840800-173854200 Weak transcription Brain Anterior Caudate brain
28 chr1:173840800-173854200 Weak transcription NHLF lung
29 chr1:173840800-173854600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:173840800-173854600 Weak transcription Hela-S3 cervix
31 chr1:173840800-173854800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:173840800-173854800 Weak transcription Brain Angular Gyrus brain
33 chr1:173840800-173855000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:173840800-173855000 Weak transcription NHDF-Ad bronchial
35 chr1:173841000-173854800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:173841000-173854800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:173841000-173864400 Weak transcription Fetal Heart heart
38 chr1:173841000-173868600 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr1:173841200-173854800 Weak transcription Primary hematopoietic stem cells blood
40 chr1:173841400-173849600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:173841800-173854800 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr1:173841800-173854800 Weak transcription K562 blood
43 chr1:173842000-173850000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:173842400-173849800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:173842400-173850000 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr1:173842400-173850000 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:173842600-173855000 Weak transcription GM12878-XiMat blood
48 chr1:173842800-173849800 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr1:173842800-173855200 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr1:173842800-173859200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015