The 2.0 version of rSNPBase

Variant report

Variant rs61827869
Chromosome Location chr1:173770042-173770043
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173729800-173781800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:173735800-173781000 Weak transcription Small Intestine intestine
3 chr1:173736600-173792400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:173744800-173790200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:173745000-173792400 Weak transcription Psoas Muscle Psoas
6 chr1:173749200-173792600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:173749800-173777800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:173751200-173773600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:173751400-173792200 Weak transcription Fetal Kidney kidney
10 chr1:173751800-173774600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:173752600-173790000 Weak transcription HepG2 liver
12 chr1:173752800-173771800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:173752800-173777000 Weak transcription Brain Angular Gyrus brain
14 chr1:173753200-173774400 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:173753200-173792200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:173753200-173792800 Weak transcription Esophagus oesophagus
17 chr1:173753400-173772200 Weak transcription Aorta Aorta
18 chr1:173753400-173774400 Weak transcription Ovary ovary
19 chr1:173753400-173775000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:173753400-173787800 Weak transcription Right Ventricle heart
21 chr1:173753400-173792600 Weak transcription Spleen Spleen
22 chr1:173753400-173792800 Weak transcription Gastric stomach
23 chr1:173753400-173792800 Weak transcription Pancreas Pancrea
24 chr1:173753600-173787600 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:173753600-173792600 Weak transcription Brain Cingulate Gyrus brain
26 chr1:173754000-173774400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:173754000-173774600 Weak transcription Brain Anterior Caudate brain
28 chr1:173754200-173792200 Weak transcription Fetal Brain Female brain
29 chr1:173754400-173774800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:173754400-173782200 Weak transcription Rectal Smooth Muscle rectum
31 chr1:173754400-173786000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:173754400-173792600 Weak transcription Brain Hippocampus Middle brain
33 chr1:173755000-173772200 Weak transcription Left Ventricle heart
34 chr1:173755200-173791600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:173755400-173772000 Weak transcription Primary B cells from peripheral blood blood
36 chr1:173755400-173772000 Weak transcription Duodenum Mucosa Duodenum
37 chr1:173755400-173772000 Weak transcription Fetal Lung lung
38 chr1:173755400-173772600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:173755400-173774800 Weak transcription NHLF lung
40 chr1:173755400-173783200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:173755400-173787400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:173755400-173787400 Weak transcription Stomach Smooth Muscle stomach
43 chr1:173755400-173792200 Weak transcription HSMMtube muscle
44 chr1:173755400-173792600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:173756800-173783400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:173756800-173791800 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:173757200-173771600 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:173757200-173772000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:173757200-173774200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:173757200-173774400 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015