Variant report
| Variant | rs56382804 |
|---|---|
| Chromosome Location | chr1:173850919-173850920 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:173838200-173854200 | Weak transcription | Gastric | stomach |
| 2 | chr1:173838200-173866000 | Weak transcription | Small Intestine | intestine |
| 3 | chr1:173838400-173854200 | Weak transcription | Esophagus | oesophagus |
| 4 | chr1:173838400-173854800 | Weak transcription | Aorta | Aorta |
| 5 | chr1:173838400-173854800 | Weak transcription | Right Ventricle | heart |
| 6 | chr1:173838400-173860200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr1:173838600-173854800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr1:173838800-173855800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr1:173839000-173854800 | Weak transcription | Colon Smooth Muscle | Colon |
| 10 | chr1:173839000-173862800 | Weak transcription | HMEC | breast |
| 11 | chr1:173839200-173855000 | Weak transcription | A549 | lung |
| 12 | chr1:173839600-173854600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 13 | chr1:173840200-173854200 | Weak transcription | Colonic Mucosa | Colon |
| 14 | chr1:173840200-173854800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 15 | chr1:173840200-173856800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr1:173840400-173855000 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr1:173840600-173854200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 18 | chr1:173840800-173854200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 19 | chr1:173840800-173854200 | Weak transcription | Brain Anterior Caudate | brain |
| 20 | chr1:173840800-173854200 | Weak transcription | NHLF | lung |
| 21 | chr1:173840800-173854600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 22 | chr1:173840800-173854600 | Weak transcription | Hela-S3 | cervix |
| 23 | chr1:173840800-173854800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 24 | chr1:173840800-173854800 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr1:173840800-173855000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 26 | chr1:173840800-173855000 | Weak transcription | NHDF-Ad | bronchial |
| 27 | chr1:173841000-173854800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 28 | chr1:173841000-173854800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 29 | chr1:173841000-173864400 | Weak transcription | Fetal Heart | heart |
| 30 | chr1:173841000-173868600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 31 | chr1:173841200-173854800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 32 | chr1:173841800-173854800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 33 | chr1:173841800-173854800 | Weak transcription | K562 | blood |
| 34 | chr1:173842600-173855000 | Weak transcription | GM12878-XiMat | blood |
| 35 | chr1:173842800-173855200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 36 | chr1:173842800-173859200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 37 | chr1:173843200-173854800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 38 | chr1:173843200-173854800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr1:173845000-173854800 | Weak transcription | Spleen | Spleen |
| 40 | chr1:173845200-173854200 | Weak transcription | Left Ventricle | heart |
| 41 | chr1:173845200-173854200 | Weak transcription | Lung | lung |
| 42 | chr1:173845200-173854800 | Weak transcription | Ovary | ovary |
| 43 | chr1:173845200-173854800 | Weak transcription | NHEK | skin |
| 44 | chr1:173845400-173853200 | Weak transcription | Fetal Intestine Small | intestine |
| 45 | chr1:173845800-173854000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 46 | chr1:173845800-173854200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 47 | chr1:173845800-173854800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 48 | chr1:173846000-173854800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 49 | chr1:173846200-173854600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr1:173846200-173854800 | Weak transcription | Thymus | Thymus |
