The 2.0 version of rSNPBase

Variant report

Variant rs72709390
Chromosome Location chr1:173690198-173690199
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173684800-173695000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:173684800-173702800 Weak transcription Spleen Spleen
3 chr1:173685000-173695200 Weak transcription Esophagus oesophagus
4 chr1:173685000-173695200 Weak transcription Pancreas Pancrea
5 chr1:173685000-173720800 Weak transcription Small Intestine intestine
6 chr1:173685200-173690400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:173685200-173692200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:173685200-173692200 Weak transcription Placenta Placenta
9 chr1:173685200-173693400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:173685200-173694000 Weak transcription Left Ventricle heart
11 chr1:173685200-173694200 Weak transcription Brain Hippocampus Middle brain
12 chr1:173685200-173694400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr1:173685200-173694400 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:173685200-173694400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:173685200-173694400 Weak transcription Brain Cingulate Gyrus brain
16 chr1:173685200-173694400 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:173685200-173694600 Weak transcription Colonic Mucosa Colon
18 chr1:173685200-173724600 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:173685400-173690400 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:173685400-173690600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:173685400-173690600 Weak transcription Fetal Muscle Trunk muscle
22 chr1:173685400-173691200 Weak transcription Thymus Thymus
23 chr1:173685400-173691400 Weak transcription Aorta Aorta
24 chr1:173685400-173694000 Weak transcription Primary B cells from peripheral blood blood
25 chr1:173685400-173694200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:173685400-173694400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:173685400-173694400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:173685400-173694400 Weak transcription Fetal Brain Male brain
29 chr1:173685400-173702800 Weak transcription Psoas Muscle Psoas
30 chr1:173685400-173725000 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:173685600-173691200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:173685600-173692200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:173685600-173693800 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:173685600-173694200 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr1:173685600-173694600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr1:173685600-173702800 Weak transcription Brain Substantia Nigra brain
37 chr1:173685800-173690600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr1:173685800-173690800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:173685800-173692400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:173685800-173693600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:173685800-173702800 Weak transcription NH-A brain
42 chr1:173685800-173703000 Weak transcription Osteobl bone
43 chr1:173685800-173724800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:173686000-173690600 Weak transcription Fetal Brain Female brain
45 chr1:173686000-173693800 Weak transcription HMEC breast
46 chr1:173686200-173690600 Weak transcription Primary B cells from cord blood blood
47 chr1:173686200-173691200 Weak transcription Stomach Smooth Muscle stomach
48 chr1:173686200-173691600 Weak transcription Primary hematopoietic stem cells blood
49 chr1:173686200-173692000 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:173686200-173692200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015