Variant report

Variant rs56080723
Chromosome Location chr10:49742483-49742484
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49732200-49750800 Weak transcription Gastric stomach
2 chr10:49734400-49743400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr10:49734400-49762400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr10:49734800-49743200 Weak transcription HMEC breast
5 chr10:49735400-49749400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr10:49735400-49756800 Weak transcription HSMMtube muscle
7 chr10:49735600-49743200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr10:49735600-49755600 Weak transcription Brain Angular Gyrus brain
9 chr10:49736200-49749400 Weak transcription HUVEC blood vessel
10 chr10:49739400-49762400 Weak transcription Stomach Smooth Muscle stomach
11 chr10:49739800-49744600 Weak transcription NH-A brain
12 chr10:49740800-49746200 Strong transcription NHLF lung
13 chr10:49741000-49747000 Strong transcription Muscle Satellite Cultured Cells --
14 chr10:49741400-49744800 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr10:49741600-49742600 Enhancers H9 Cell Line embryonic stem cell
16 chr10:49741600-49743000 Enhancers HUES64 Cell Line embryonic stem cell
17 chr10:49741600-49743200 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr10:49741600-49743200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr10:49741600-49745200 Enhancers HUES6 Cell Line embryonic stem cell
20 chr10:49741600-49745200 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr10:49741600-49746400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr10:49741600-49746600 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr10:49741600-49746600 Enhancers HUES48 Cell Line embryonic stem cell
24 chr10:49741600-49746600 Strong transcription Osteobl bone
25 chr10:49741800-49742600 Enhancers Fetal Muscle Trunk muscle
26 chr10:49741800-49742800 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr10:49741800-49742800 Enhancers Brain Anterior Caudate brain
28 chr10:49741800-49742800 Enhancers Brain Hippocampus Middle brain
29 chr10:49741800-49744000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr10:49741800-49746400 Enhancers H1 Cell Line embryonic stem cell
31 chr10:49742000-49742600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr10:49742000-49742600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:49742000-49742600 Enhancers Cortex derived primary cultured neurospheres brain
34 chr10:49742000-49742600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr10:49742000-49742600 Enhancers Aorta Aorta
36 chr10:49742000-49742600 Enhancers Fetal Muscle Leg muscle
37 chr10:49742000-49742800 Enhancers Brain Cingulate Gyrus brain
38 chr10:49742000-49742800 Enhancers Brain Inferior Temporal Lobe brain
39 chr10:49742000-49744600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr10:49742000-49745200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
41 chr10:49742000-49745400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr10:49742000-49746400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr10:49742200-49742800 Enhancers Brain Substantia Nigra brain
44 chr10:49742200-49742800 Weak transcription NHDF-Ad bronchial
45 chr10:49742200-49747200 Strong transcription HSMM muscle

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