The 2.0 version of rSNPBase

Variant report

Variant rs56135446
Chromosome Location chr14:72138553-72138554
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:72088200-72159600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr14:72109800-72150800 Weak transcription Colonic Mucosa Colon
3 chr14:72111200-72139000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr14:72113800-72141600 Weak transcription Placenta Amnion Placenta Amnion
5 chr14:72118600-72142000 Weak transcription Fetal Brain Male brain
6 chr14:72118600-72191400 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr14:72119000-72141800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr14:72119200-72152200 Weak transcription Primary hematopoietic stem cells blood
9 chr14:72119800-72147400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr14:72123800-72146800 Weak transcription Psoas Muscle Psoas
11 chr14:72125400-72142000 Weak transcription Small Intestine intestine
12 chr14:72125400-72151000 Weak transcription Ovary ovary
13 chr14:72125800-72138600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr14:72126200-72159800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr14:72126400-72139000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr14:72126400-72139200 Weak transcription HepG2 liver
17 chr14:72126400-72142400 Weak transcription Stomach Mucosa stomach
18 chr14:72126600-72141200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr14:72128000-72167800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr14:72128400-72139200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr14:72128600-72141600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr14:72128600-72142200 Weak transcription Fetal Brain Female brain
23 chr14:72128800-72147800 Weak transcription Colon Smooth Muscle Colon
24 chr14:72129400-72141800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr14:72129400-72153600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr14:72129400-72196800 Weak transcription Right Ventricle heart
27 chr14:72129600-72138800 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr14:72131800-72139000 Weak transcription Hela-S3 cervix
29 chr14:72131800-72154000 Weak transcription Fetal Heart heart
30 chr14:72132400-72139000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr14:72134000-72139200 Weak transcription Brain Substantia Nigra brain
32 chr14:72134000-72153200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr14:72134200-72151000 Weak transcription NHDF-Ad bronchial
34 chr14:72134200-72159000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr14:72134400-72139200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr14:72135000-72142600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr14:72135200-72139000 Weak transcription Aorta Aorta
38 chr14:72135600-72138800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr14:72135600-72139000 Weak transcription NHLF lung
40 chr14:72135600-72140800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr14:72136000-72141800 Weak transcription Brain Germinal Matrix brain
42 chr14:72137200-72143200 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr14:72137400-72139000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr14:72137400-72139200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr14:72137400-72141600 Strong transcription Osteobl bone
46 chr14:72137400-72142400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr14:72137600-72139800 Strong transcription NH-A brain
48 chr14:72137600-72142600 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr14:72137800-72138800 Genic enhancers Fetal Thymus thymus
50 chr14:72137800-72139000 Strong transcription Lung lung

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Last update: Aug 31, 2015