The 2.0 version of rSNPBase

Variant report

Variant rs56157878
Chromosome Location chr13:110522864-110522865
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:110516000-110523400 Weak transcription Placenta Amnion Placenta Amnion
2 chr13:110521000-110523000 Enhancers Spleen Spleen
3 chr13:110521400-110523600 Enhancers Fetal Heart heart
4 chr13:110521600-110523000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr13:110521600-110523000 Flanking Active TSS Stomach Smooth Muscle stomach
6 chr13:110521600-110523200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
7 chr13:110522000-110523000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr13:110522000-110525200 Weak transcription Dnd41 blood
9 chr13:110522200-110523000 Enhancers Lung lung
10 chr13:110522200-110523200 Weak transcription Hela-S3 cervix
11 chr13:110522200-110526400 Weak transcription Fetal Brain Male brain
12 chr13:110522400-110523000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr13:110522400-110523000 Enhancers Right Ventricle heart
14 chr13:110522400-110523200 Enhancers NH-A brain
15 chr13:110522400-110523800 Enhancers Duodenum Mucosa Duodenum
16 chr13:110522400-110525600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr13:110522400-110526800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr13:110522600-110523000 Enhancers Brain Substantia Nigra brain
19 chr13:110522600-110523000 Bivalent Enhancer Fetal Stomach stomach
20 chr13:110522600-110523000 Enhancers Ovary ovary
21 chr13:110522600-110523000 Enhancers Right Atrium heart
22 chr13:110522600-110523200 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr13:110522600-110523200 Enhancers Placenta Placenta
24 chr13:110522600-110523200 Enhancers Left Ventricle heart
25 chr13:110522600-110523200 Enhancers Skeletal Muscle Male skeletal muscle
26 chr13:110522600-110523400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr13:110522600-110523600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr13:110522600-110523600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr13:110522600-110523600 Enhancers Pancreas Pancrea
30 chr13:110522600-110523600 Enhancers HSMM muscle
31 chr13:110522600-110523600 Enhancers HSMMtube muscle
32 chr13:110522600-110526200 Weak transcription Fetal Intestine Small intestine
33 chr13:110522600-110526800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr13:110522600-110526800 Weak transcription Osteobl bone
35 chr13:110522600-110527000 Weak transcription Liver Liver
36 chr13:110522600-110527600 Weak transcription Fetal Brain Female brain
37 chr13:110522600-110537000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr13:110522800-110523000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr13:110522800-110523000 Enhancers Colon Smooth Muscle Colon
40 chr13:110522800-110523000 Enhancers Rectal Smooth Muscle rectum
41 chr13:110522800-110523000 Enhancers NHLF lung
42 chr13:110522800-110523200 Enhancers Adipose Nuclei Adipose
43 chr13:110522800-110523200 Enhancers A549 lung
44 chr13:110522800-110523200 Enhancers NHDF-Ad bronchial
45 chr13:110522800-110524000 Enhancers Muscle Satellite Cultured Cells --
46 chr13:110522800-110526600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr13:110522800-110526800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:110522800-110528000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015