Variant report

Variant rs56194122
Chromosome Location chr19:41486712-41486713
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41484600-41489200 Enhancers Fetal Intestine Large intestine
2 chr19:41484600-41489200 Enhancers Fetal Intestine Small intestine
3 chr19:41484600-41489800 Enhancers Liver Liver
4 chr19:41484800-41487200 Enhancers Rectal Mucosa Donor 31 rectum
5 chr19:41485400-41487000 Enhancers Stomach Mucosa stomach
6 chr19:41485600-41487000 Enhancers HepG2 liver
7 chr19:41485800-41486800 Weak transcription Colonic Mucosa Colon
8 chr19:41486000-41488000 Enhancers ES-I3 Cell Line embryonic stem cell
9 chr19:41486000-41488400 Weak transcription Duodenum Mucosa Duodenum
10 chr19:41486200-41486800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr19:41486200-41487000 Enhancers H9 Cell Line embryonic stem cell
12 chr19:41486200-41488000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr19:41486200-41488200 Enhancers HUES48 Cell Line embryonic stem cell
14 chr19:41486200-41489800 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr19:41486200-41490000 Enhancers H1 Cell Line embryonic stem cell
16 chr19:41486400-41486800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
17 chr19:41486400-41487000 Enhancers Pancreas Pancrea
18 chr19:41486400-41487400 Enhancers Sigmoid Colon Sigmoid Colon
19 chr19:41486400-41487800 Enhancers iPS-18 Cell Line embryonic stem cell
20 chr19:41486400-41488200 Enhancers HUES6 Cell Line embryonic stem cell
21 chr19:41486600-41486800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
22 chr19:41486600-41486800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
23 chr19:41486600-41487600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr19:41486600-41488800 Enhancers ES-WA7 Cell Line embryonic stem cell
25 chr19:41486600-41489200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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